RNA–Protein interactions for RNA: YAL035W

FUN12, Transcript of Translation initiation factor eIF5B, yeast

Gene FUN12, Length 3,009 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FUN12	YAL035W	OSW1	Q08692	278 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	YPR202W	Q08993	238 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	SNU23	Q12368	194 aa	Predicted RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	RPL4A	P10664	362 aa	Known RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	GCN3	P14741	305 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	UTP11	P34247	250 aa	Predicted RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	ARC40	P38328	384 aa	Known RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	ARN2	P38724	620 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	GAA1	P39012	614 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	RPL4B	P49626	362 aa	Known RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	SPG4	Q04438	115 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	YOR376W	Q08900	122 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	BSC1	Q12140	328 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	YLR462W	O13556	202 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	CDC28	P00546	298 aa	Known RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	SAM2	P19358	384 aa	Known RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	SEC14	P24280	304 aa	Known RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	CTS1	P29029	562 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	OAC1	P32332	324 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	ALK2	P32789	676 aa	Predicted RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
FUN12	YAL035W	YHL049C	P38722	271 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	YEL075C	P39972	122 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	YER189W	P40104	122 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	HST4	P53688	370 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	CWC25	P53854	179 aa	Known RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	BET5	Q03630	159 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	PKR1	Q03880	122 aa	Known RBP	3.14	□□□□□ -1.91
FUN12	YAL035W	HEM25	Q07534	307 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	YOR186W	Q08560	144 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	FDH1	Q08911	376 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	HRT3	Q12347	344 aa		3.14	□□□□□ -1.91
FUN12	YAL035W	HKR1	P41809	1802 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	MRS3	P10566	314 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	FUN26	P31381	517 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	YMC1	P32331	307 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	SFK1	P35735	353 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	YHL044W	P38727	235 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	TRR2	P38816	342 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	RIO2	P40160	425 aa	Known RBP	3.13	□□□□□ -1.91
FUN12	YAL035W	ARG2	P40360	574 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	XBP1	P40489	647 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	VPS25	P47142	202 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	NHP6A	P11632	93 aa	Known RBP	3.13	□□□□□ -1.91
FUN12	YAL035W	PHD1	P36093	366 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	DRE2	P36152	348 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	YBR032W	P38223	100 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	HEM14	P40012	539 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	GWT1	P47026	490 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	ARL3	Q02804	198 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	CTL1	Q03220	320 aa	Known RBP	3.13	□□□□□ -1.91
FUN12	YAL035W	AIM34	Q03673	198 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	LDB18	Q07887	179 aa		3.13	□□□□□ -1.91
FUN12	YAL035W	HSP30	P25619	332 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	AVT1	P47082	602 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	ILM1	P47155	203 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	LIP2	Q06005	328 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	FRQ1	Q06389	190 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	CNB1	P25296	175 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	YCR025C	P25352	136 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	AHC2	P25649	128 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	GLC7	P32598	312 aa	Known RBP	3.12	□□□□□ -1.91
FUN12	YAL035W	YHR127W	P38833	243 aa	Known RBP	3.12	□□□□□ -1.91
FUN12	YAL035W	PDS1	P40316	373 aa	Predicted RBP	3.12	□□□□□ -1.91
FUN12	YAL035W	PAN6	P40459	309 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	MRH4	P53166	561 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	RSC9	Q03124	581 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	RRS1	Q08746	203 aa	Known RBP	3.12	□□□□□ -1.91
FUN12	YAL035W	FLO11	P08640	1367 aa		3.12	□□□□□ -1.91
FUN12	YAL035W	YKR104W	P0CE69	306 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	SPS100	P13130	326 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	CSG2	P35206	410 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	YIL169C	P40442	995 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	BXI1	P48558	297 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	CRZ1	P53968	678 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	DID2	P69771	204 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	MRX8	Q05473	314 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	PFA4	Q12006	378 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	PST2	Q12335	198 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	PHO2	P07269	559 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	MRPS28	P21771	286 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	PEX2	P32800	271 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	SOL2	P37262	315 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	DOG2	P38773	246 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	AVT4	P50944	713 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	LSM7	P53905	115 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	ELP3	Q02908	557 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	YML018C	Q03730	393 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	YHC1	Q05900	231 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	YPL257W	Q08974	193 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	THP3	Q12049	470 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	YCR024C-B	Q3E7Z8	88 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	GSC2	P40989	1895 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	RPL23A	P0CX41	137 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	RPL23B	P0CX42	137 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	CDC43	P18898	376 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	SIP2	P34164	415 aa	Known RBP	3.11	□□□□□ -1.91
FUN12	YAL035W	MIX23	P38162	196 aa		3.11	□□□□□ -1.91
FUN12	YAL035W	PEX22	P39718	180 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms