RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 DDX19AQ9NUU7 478 aaKnown RBP8.14□□□□□ -1.11
CIITA-214ENST00000636238 FAM13BQ9NYF5 915 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 MAFFQ9ULX9 164 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 FANCMQ8IYD8 2048 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 TMEM189-UBE2V1I3L0A0 370 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 TBX3O15119 743 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 NEMFO60524 1076 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 LRRN2O75325 713 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 OR52Z1P0C646 297 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 GCFC2P16383 781 aaKnown RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 PMLP29590 882 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 SYKP43405 635 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 SCNN1GP51170 649 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 AFF1P51825 1210 aaKnown RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 ZNF445P59923 1031 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 MTAPQ13126 283 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 TUSC3Q13454 348 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 FZD5Q13467 585 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 PSMD5Q16401 504 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 LONRF3Q496Y0 759 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 PABPC1LQ4VXU2 614 aaKnown RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 SLC27A1Q6PCB7 646 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 DTHD1Q6ZMT9 781 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 TPRG1Q6ZUI0 275 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 KSR1Q8IVT5 923 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 PDILTQ8N807 584 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 ZNF579Q8NAF0 562 aaKnown RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 RNF149Q8NC42 400 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 LEMD2Q8NC56 503 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 LNX1Q8TBB1 728 aaPredicted RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 ERCC4Q92889 916 aaPredicted RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 IRF7Q92985 503 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 GJA10Q969M2 543 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 E2F7Q96AV8 911 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 CEP170P1Q96L14 293 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 PRIMPOLQ96LW4 560 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 RPP25Q9BUL9 199 aaKnown RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 TRIM6Q9C030 488 aaPredicted RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 MINDY3Q9H8M7 445 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 PARD6AQ9NPB6 346 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 SEMA4GQ9NTN9 838 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 SERTAD1Q9UHV2 236 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 HPSEQ9Y251 543 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 MTF2Q9Y483 593 aaPredicted RBP8.13□□□□□ -1.11
CIITA-214ENST00000636238 BACE2Q9Y5Z0 518 aa8.13□□□□□ -1.11
CIITA-214ENST00000636238 BAHCC1Q9P281 2608 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 A0A087WWV3 80 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 A0A087X0B3 334 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 FAM237AA0A1B0GTK4 181 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 A0A1B0GUA9 196 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 PP2D1A8MPX8 630 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 ZNF197O14709 1029 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 POLR2DO15514 142 aaKnown RBP8.12□□□□□ -1.11
CIITA-214ENST00000636238 LETM1O95202 739 aaPredicted RBP8.12□□□□□ -1.11
CIITA-214ENST00000636238 LYPLA2O95372 231 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 SPATA31D3P0C874 917 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 SRGAP2CP0DJJ0 459 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 CDC25AP30304 524 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 TXKP42681 527 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 LRRC32Q14392 662 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 EMC2Q15006 297 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 EPHA7Q15375 998 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 CALCRLQ16602 461 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 RTP2Q5QGT7 225 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 ARL6IP4Q66PJ3 421 aaKnown RBP8.12□□□□□ -1.11
CIITA-214ENST00000636238 IL31Q6EBC2 164 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 PPP4R3AQ6IN85 833 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 LRSAM1Q6UWE0 723 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 PRR23CQ6ZRP0 262 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 SPATA31D4Q6ZUB0 917 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 LONP2Q86WA8 852 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 SYNPOQ8N3V7 929 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 SPEM1Q8N4L4 309 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 GSTCDQ8NEC7 633 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 DEPDC1BQ8WUY9 529 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 MTMR9Q96QG7 549 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 CLSTN3Q9BQT9 956 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 TSPY26PQ9H489 355 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 ZSWIM4Q9H7M6 989 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 TRPV4Q9HBA0 871 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 KCNMB3Q9NPA1 279 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 DDX25Q9UHL0 483 aaKnown RBP8.12□□□□□ -1.11
CIITA-214ENST00000636238 MRPS23Q9Y3D9 190 aaKnown RBP8.12□□□□□ -1.11
CIITA-214ENST00000636238 MORC2Q9Y6X9 1032 aaPredicted RBP8.12□□□□□ -1.11
CIITA-214ENST00000636238 CFAP47Q6ZTR5 3102 aa8.12□□□□□ -1.11
CIITA-214ENST00000636238 MYH9P35579 1960 aaKnown RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 PKD1L2Q7Z442 2459 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 CCDC163A0A0D9SF12 145 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.11□□□□□ -1.11
CIITA-214ENST00000636238 ARHGEF37A1IGU5 675 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 TMEM8BA6NDV4 472 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 GOLGA6L3A6NEY3 463 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 LAD1O00515 517 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 TRAPPC3O43617 180 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 MARCH6O60337 910 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 DGAT1O75907 488 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 AKAP3O75969 853 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 FGFR3P22607 806 aa8.11□□□□□ -1.11
CIITA-214ENST00000636238 YWHABP31946 246 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms