RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SPATA31D4Q6ZUB0 917 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 TXNRD3Q86VQ6 643 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 MYCT1Q8N699 235 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 PRR11Q96HE9 360 aaPredicted RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 ASCC2Q9H1I8 757 aaPredicted RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 KIAA1586Q9HCI6 787 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 STX18Q9P2W9 335 aaKnown RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 LNPEPQ9UIQ6 1025 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 ZWINTO95229 277 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 FGFR1P11362 822 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 MAGEA4P43358 317 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 PSMC4P43686 418 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 USP46P62068 366 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 LIN52Q52LA3 116 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 PRR16Q569H4 304 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 KAZNQ674X7 775 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 TTBK2Q6IQ55 1244 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 KCTD1Q719H9 257 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 CFAP61Q8NHU2 1237 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 MAML1Q92585 1016 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 ZNF287Q9HBT7 754 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 ETNK2Q9NVF9 386 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 PKD2L1Q9P0L9 805 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 FRMD4BQ9Y2L6 1034 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 TRPM3Q9HCF6 1732 aaPredicted RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 C2CD2LO14523 706 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 HNRNPRO43390 633 aaKnown RBP16.09■□□□□ 0.17
PMS1-221ENST00000624204 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
PMS1-221ENST00000624204 PLS3P13797 630 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 PGM1P36871 562 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 FBXO33Q7Z6M2 555 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 SESTD1Q86VW0 696 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 SYT2Q8N9I0 419 aaPredicted RBP16.09■□□□□ 0.17
PMS1-221ENST00000624204 HAUS1Q96CS2 278 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 FAM84AQ96KN4 292 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 MMADHCQ9H3L0 296 aaPredicted RBP16.09■□□□□ 0.17
PMS1-221ENST00000624204 SAR1AQ9NR31 198 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 ACTL7BQ9Y614 415 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 A0A1W2PPM1 405 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 A6NJR5 290 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 UBAP1LF5GYI3 381 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 TGFB1I1O43294 461 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 LDHBP07195 334 aaKnown RBP16.09■□□□□ 0.17
PMS1-221ENST00000624204 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 BCRP11274 1271 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 SERPINB3P29508 390 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 HYIQ5T013 277 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 NMD3Q96D46 503 aaKnown RBP16.09■□□□□ 0.17
PMS1-221ENST00000624204 NSL1Q96IY1 281 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 LRP5O75197 1615 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 BCL9O00512 1426 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 ZBTB39O15060 712 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 MAGEB2O15479 319 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 FAM13AO94988 1023 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 NTSR2O95665 410 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 IVDP26440 423 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 RINLQ6ZS11 566 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 FNBP1Q96RU3 617 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 TLE6Q9H808 572 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 ARMCX1Q9P291 453 aa16.09■□□□□ 0.17
PMS1-221ENST00000624204 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.09■□□□□ 0.17
PMS1-221ENST00000624204 FAM200BP0CF97 657 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 ADRA1DP25100 572 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 MAPK6Q16659 721 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.08■□□□□ 0.16
PMS1-221ENST00000624204 SDCCAG8Q86SQ7 713 aaPredicted RBP16.08■□□□□ 0.16
PMS1-221ENST00000624204 RIOX1Q9H6W3 641 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 TAS2R1Q9NYW7 299 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 ANKFY1Q9P2R3 1169 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 PHF24Q9UPV7 400 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 R3HDM2Q9Y2K5 976 aaKnown RBP16.08■□□□□ 0.16
PMS1-221ENST00000624204 SLC4A7Q9Y6M7 1214 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 RREB1Q92766 1687 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 TCEA3O75764 348 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 USP1O94782 785 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 SETSIPP0DME0 302 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 DSG1Q02413 1049 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 PARP10Q53GL7 1025 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 OLFML2BQ68BL8 750 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 LLGL2Q6P1M3 1020 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 LCA5Q86VQ0 697 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 LRRC4BQ9NT99 713 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 ZNF212Q9UDV6 495 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 SLIT2O94813 1529 aa16.08■□□□□ 0.16
PMS1-221ENST00000624204 TTC36A6NLP5 189 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 SGPL1O95470 568 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 KRT4P19013 534 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 CTC1Q2NKJ3 1217 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 ACBD5Q5T8D3 534 aaPredicted RBP16.07■□□□□ 0.16
PMS1-221ENST00000624204 TTC7BQ86TV6 843 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 NCAPG2Q86XI2 1143 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 RIBC1Q8N443 379 aaPredicted RBP16.07■□□□□ 0.16
PMS1-221ENST00000624204 DENND1AQ8TEH3 1009 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 KAT5Q92993 513 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 PCDHB18PQ96TA0 734 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 MYO3BQ8WXR4 1341 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 ZSCAN9O15535 394 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms