RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 HOOK3Q86VS8 718 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 C10orf67Q8IYJ2 551 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 CGRRF1Q99675 332 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 TARS2Q9BW92 718 aaKnown RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 NRBP2Q9NSY0 501 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 ANKFY1Q9P2R3 1169 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 FEZ2Q9UHY8 353 aaPredicted RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 NOVA2Q9UNW9 492 aaKnown RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 HTTP42858 3142 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 SBF1O95248 1867 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 GSTTP1A0A1W2PQM5 241 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 TRIM66O15016 1216 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 CLDN3O15551 220 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 FARP2O94887 1054 aaPredicted RBP8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 HIRAP54198 1017 aaPredicted RBP8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 PPP2R2AP63151 447 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 TARBP2Q15633 366 aaKnown RBP8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 TREML2Q5T2D2 321 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 FAM160B1Q5W0V3 765 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 DENND2CQ68D51 928 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 B4GALNT4Q76KP1 1039 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 MON1BQ7L1V2 547 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 RIOX2Q8IUF8 465 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 MAIP1Q8WWC4 291 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 PCYT2Q99447 389 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 FAM129AQ9BZQ8 928 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 RASSF4Q9H2L5 321 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 EPB41L4BQ9H329 900 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 SLC12A6Q9UHW9 1150 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 PCDHB4Q9Y5E5 795 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 SNCAIPQ9Y6H5 919 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 ADGRA2Q96PE1 1338 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 ADCY3O60266 1144 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 ECEL1O95672 775 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 POTEJP0CG39 1038 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 EDNRBP24530 442 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 TBXAS1P24557 533 aaPredicted RBP8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 STAT5BP51692 787 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 MAGOHP61326 146 aaKnown RBP8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 VGLL4Q14135 290 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 NEDD9Q14511 834 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 SLMAPQ14BN4 828 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 SGO2Q562F6 1265 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 ZBTB41Q5SVQ8 909 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 LIN9Q5TKA1 542 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 SLCO2A1Q92959 643 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 ART4Q93070 314 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 CYFIP2Q96F07 1278 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 APOBEC3GQ9HC16 384 aaKnown RBP8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 BTBD7Q9P203 1132 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 PTPN22Q9Y2R2 807 aa8.88□□□□□ -0.99
SND1-IT1-201ENST00000623342 CNTNAP2Q9UHC6 1331 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 SOWAHBA6NEL2 793 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 PROSCO94903 275 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 EDN1P05305 212 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 CLTAP09496 248 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 GNA15P30679 374 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 MAGEA9P43362 315 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 KCNJ1P48048 391 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 CAPSQ13938 189 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 PPP1R7Q15435 360 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 PPP1R2P3Q6NXS1 205 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 TMEM270Q6UE05 265 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 NLRP14Q86W24 1093 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 SPATS2Q86XZ4 545 aaKnown RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 ABRAQ8N0Z2 381 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 GPC2Q8N158 579 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 RNF25Q96BH1 459 aaPredicted RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 TLCD1Q96CP7 247 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 VCPIP1Q96JH7 1222 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 TRIM7Q9C029 511 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 CNTN6Q9UQ52 1028 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 FAM169AQ9Y6X4 670 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 DCDC2CA8MYV0 355 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 ANKRD65E5RJM6 399 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 E7EVH7 732 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 MAFO75444 373 aaPredicted RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 SHBGP04278 402 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 TGFB3P10600 412 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 MAN1A1P33908 653 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 AP3M2P53677 418 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 SEC24CP53992 1094 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 NOMO3P69849 1222 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 NOP14P78316 857 aaKnown RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 PTP4A2Q12974 167 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 BYSLQ13895 437 aaKnown RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 SLC29A2Q14542 456 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 ZPBP2Q6X784 338 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 PHLDB2Q86SQ0 1253 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 CROCCP2Q86T23 111 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 NCAPG2Q86XI2 1143 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 PHF13Q86YI8 300 aaPredicted RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 RBBP8NLQ8NC74 664 aaPredicted RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 OR5B17Q8NGF7 314 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 MYCBPAPQ8TBZ2 947 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 ZNF473Q8WTR7 871 aaKnown RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 C1orf54Q8WWF1 131 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 CCT8L2Q96SF2 557 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 C11orf70Q9BRQ4 267 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms