RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 JAKMIP2Q96AA8 810 aa12.57□□□□□ -0.4
TARDBP-217ENST00000616545 PPP1R10Q96QC0 940 aaKnown RBP12.57□□□□□ -0.4
TARDBP-217ENST00000616545 GAD1Q99259 594 aa12.57□□□□□ -0.4
TARDBP-217ENST00000616545 MTMR12Q9C0I1 747 aa12.57□□□□□ -0.4
TARDBP-217ENST00000616545 NUCKS1Q9H1E3 243 aaKnown RBP12.57□□□□□ -0.4
TARDBP-217ENST00000616545 VRTNQ9H8Y1 702 aa12.57□□□□□ -0.4
TARDBP-217ENST00000616545 DPP3Q9NY33 737 aa12.57□□□□□ -0.4
TARDBP-217ENST00000616545 GCNT4Q9P109 453 aa12.57□□□□□ -0.4
TARDBP-217ENST00000616545 CITO14578 2027 aa12.57□□□□□ -0.4
TARDBP-217ENST00000616545 RALGAPA2Q2PPJ7 1873 aa12.57□□□□□ -0.4
TARDBP-217ENST00000616545 A0A1W2PQJ5 194 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 PTGESO14684 152 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 HLA-DRAP01903 254 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 P4HA1P13674 534 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 TRIM21P19474 475 aaKnown RBP12.56□□□□□ -0.4
TARDBP-217ENST00000616545 PON1P27169 355 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 MLH1P40692 756 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 PIK3CAP42336 1068 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 CCDC173Q0VFZ6 552 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 KCNMA1Q12791 1236 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 MYO1EQ12965 1108 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 TRIM65Q6PJ69 517 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 PPFIBP1Q86W92 1011 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 DRC7Q8IY82 874 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 GSTCDQ8NEC7 633 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 OR5B17Q8NGF7 314 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 LMO3Q8TAP4 145 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 PHOSPHO2Q8TCD6 241 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 HERVK_113Q902F9 699 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 PDLIM2Q96JY6 352 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-217ENST00000616545 ZNF560Q96MR9 790 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 ZMAT2Q96NC0 199 aaKnown RBP12.56□□□□□ -0.4
TARDBP-217ENST00000616545 NT5C1BQ96P26 610 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 INTS2Q9H0H0 1204 aaKnown RBP12.56□□□□□ -0.4
TARDBP-217ENST00000616545 MMRN2Q9H8L6 949 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 KLK14Q9P0G3 267 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 MYO6Q9UM54 1294 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 PTPRJQ12913 1337 aa12.56□□□□□ -0.4
TARDBP-217ENST00000616545 TTC3P53804 2025 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 ALPK3Q96L96 1907 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 ANO9A1A5B4 782 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 ARHGEF37A1IGU5 675 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 TULP1O00294 542 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-217ENST00000616545 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 TBXAS1P24557 533 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-217ENST00000616545 GSDMDP57764 484 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 WDR5P61964 334 aaKnown RBP12.55□□□□□ -0.4
TARDBP-217ENST00000616545 TUSC3Q13454 348 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 TCTN1Q2MV58 587 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 TTC39CQ8N584 583 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 C1orf127Q8N9H9 656 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-217ENST00000616545 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 LPPQ93052 612 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 CEP72Q9P209 647 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 APEX2Q9UBZ4 518 aa12.55□□□□□ -0.4
TARDBP-217ENST00000616545 SCN5AQ14524 2016 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 MEIS3P2A8K0S8 358 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 PIRO00625 290 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 DGKIO75912 1065 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 VNN1O95497 513 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 ASS1P00966 412 aaKnown RBP12.54□□□□□ -0.4
TARDBP-217ENST00000616545 ITGB3P05106 788 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 SLC9A1P19634 815 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 SCNN1GP51170 649 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 MFAP3P55082 362 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 GCNT1Q02742 428 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 TMEM240Q5SV17 173 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 KLHDC7AQ5VTJ3 777 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 C9orf57Q5W0N0 161 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 LMBRD2Q68DH5 695 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-217ENST00000616545 ZNF365Q70YC5 407 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 TMC6Q7Z403 805 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 CNGA4Q8IV77 575 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 LRRC43Q8N309 656 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 TET1Q8NFU7 2136 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 CXorf38Q8TB03 319 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 FAM193BQ96PV7 902 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-217ENST00000616545 SLC9A7Q96T83 725 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 TMEM175Q9BSA9 504 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 CRACR2AQ9BSW2 395 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 LSM14BQ9BX40 385 aaKnown RBP12.54□□□□□ -0.4
TARDBP-217ENST00000616545 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 SIX4Q9UIU6 781 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
TARDBP-217ENST00000616545 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 ANK1P16157 1881 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 CST3P01034 146 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-217ENST00000616545 KRT19P08727 400 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 CCDC172P0C7W6 258 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 ACRP10323 421 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 FGFR1P11362 822 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 UCHL3P15374 230 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 SYN1P17600 705 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 MYL6P60660 151 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms