RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 CACNA1AO00555 2505 aa19.32■□□□□ 0.68
MUC1-224ENST00000611577 NR1I2O75469 434 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 EFEMP2O95967 443 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 ABCD1P33897 745 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 ZNF131P52739 623 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 DSG1Q02413 1049 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 DSC1Q08554 894 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 SLC27A1Q6PCB7 646 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 CDR2LQ86X02 465 aaPredicted RBP19.31■□□□□ 0.68
MUC1-224ENST00000611577 SFR1Q86XK3 245 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 SLC44A3Q8N4M1 653 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 ZNF707Q96C28 371 aaPredicted RBP19.31■□□□□ 0.68
MUC1-224ENST00000611577 ZFP42Q96MM3 310 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 NTPCRQ9BSD7 190 aaKnown RBP19.31■□□□□ 0.68
MUC1-224ENST00000611577 MRPL4Q9BYD3 311 aaKnown RBP19.31■□□□□ 0.68
MUC1-224ENST00000611577 MRPL44Q9H9J2 332 aaKnown RBP19.31■□□□□ 0.68
MUC1-224ENST00000611577 PIDD1Q9HB75 910 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 SEL1LQ9UBV2 794 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 HPSEQ9Y251 543 aa19.31■□□□□ 0.68
MUC1-224ENST00000611577 NPTXRO95502 500 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 SRFP11831 508 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 SCP2P22307 547 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 MATR3P43243 847 aaKnown RBP eCLIP19.3■□□□□ 0.68
MUC1-224ENST00000611577 NCKAP1LP55160 1127 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 ATF7IP2Q5U623 682 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 GET4Q7L5D6 327 aaPredicted RBP19.3■□□□□ 0.68
MUC1-224ENST00000611577 PALB2Q86YC2 1186 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 TMEM161BQ8NDZ6 487 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 RIN2Q8WYP3 895 aaPredicted RBP19.3■□□□□ 0.68
MUC1-224ENST00000611577 NXPE3Q969Y0 559 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 DNAJC19Q96DA6 116 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 B3GALT6Q96L58 329 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 TCHPQ9BT92 498 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 TRIM9Q9C026 710 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 BLZF1Q9H2G9 400 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 GOLPH3LQ9H4A5 285 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 MIOSQ9NXC5 875 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 TBC1D7Q9P0N9 293 aa19.3■□□□□ 0.68
MUC1-224ENST00000611577 A0A1B0GUA9 196 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 TGM5O43548 720 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 MAPTP10636 758 aaKnown RBP19.29■□□□□ 0.68
MUC1-224ENST00000611577 GLYCTKQ8IVS8 523 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 GPR152Q8TDT2 470 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 HDAC7Q8WUI4 952 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 COLEC11Q9BWP8 271 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 PLEKHA4Q9H4M7 779 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 USP20Q9Y2K6 914 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 R4GN57 208 aa19.29■□□□□ 0.68
MUC1-224ENST00000611577 FAM237AA0A1B0GTK4 181 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 ACTN4O43707 911 aaKnown RBP19.28■□□□□ 0.68
MUC1-224ENST00000611577 ZNF202O95125 648 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 GCNT3O95395 438 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 LMNAP02545 664 aaKnown RBP19.28■□□□□ 0.68
MUC1-224ENST00000611577 NMT1P30419 496 aaKnown RBP19.28■□□□□ 0.68
MUC1-224ENST00000611577 DCAF4L1Q3SXM0 396 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 ZNF568Q3ZCX4 644 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 FUT10Q6P4F1 479 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 STXBP4Q6ZWJ1 553 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 GRAMD1CQ8IYS0 662 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 CCDC47Q96A33 483 aaKnown RBP19.28■□□□□ 0.68
MUC1-224ENST00000611577 PAGE5Q96GU1 130 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 C7orf25Q9BPX7 421 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 NXF3Q9H4D5 531 aaKnown RBP19.28■□□□□ 0.68
MUC1-224ENST00000611577 PDZD7Q9H5P4 517 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 ARHGEF3Q9NR81 526 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.28■□□□□ 0.68
MUC1-224ENST00000611577 CHST7Q9NS84 486 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 ZDHHC7Q9NXF8 308 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 GIT1Q9Y2X7 761 aa19.28■□□□□ 0.68
MUC1-224ENST00000611577 DCNP07585 359 aaKnown RBP19.27■□□□□ 0.68
MUC1-224ENST00000611577 RPL17P18621 184 aaKnown RBP19.27■□□□□ 0.68
MUC1-224ENST00000611577 LIG4P49917 911 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 USP41Q3LFD5 358 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 NT5DC1Q5TFE4 455 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 KRBA2Q6ZNG9 492 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 GBP4Q96PP9 640 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 TARS2Q9BW92 718 aaKnown RBP19.27■□□□□ 0.68
MUC1-224ENST00000611577 GPR62Q9BZJ7 368 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 PRKD2Q9BZL6 878 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 SEMA4AQ9H3S1 761 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.27■□□□□ 0.68
MUC1-224ENST00000611577 ANKFY1Q9P2R3 1169 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 TBX20Q9UMR3 447 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 TNFSF13BQ9Y275 285 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 DOCK8Q8NF50 2099 aa19.27■□□□□ 0.68
MUC1-224ENST00000611577 TTLL13PA6NNM8 815 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 HNRNPDLO14979 420 aaKnown RBP19.26■□□□□ 0.67
MUC1-224ENST00000611577 PAPLNO95428 1278 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 C1RP00736 705 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 MYL1P05976 194 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 HARSP12081 509 aaKnown RBP19.26■□□□□ 0.67
MUC1-224ENST00000611577 LAMP2P13473 410 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 AKAP5P24588 427 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 CASP1P29466 404 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 CREMQ03060 361 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 FAM160A1Q05DH4 1040 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 CUL4BQ13620 913 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 HTR4Q13639 388 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 ALCAMQ13740 583 aa19.26■□□□□ 0.67
MUC1-224ENST00000611577 UNC13DQ70J99 1090 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms