RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 DNAJC25Q9H1X3 360 aa12.59□□□□□ -0.39
LINC00539-204ENST00000608957 GRPEL1Q9HAV7 217 aa12.59□□□□□ -0.39
LINC00539-204ENST00000608957 DZANK1Q9NVP4 752 aa12.59□□□□□ -0.39
LINC00539-204ENST00000608957 ZNF318Q5VUA4 2279 aa12.59□□□□□ -0.39
LINC00539-204ENST00000608957 TSC2P49815 1807 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 MYMKA6NI61 221 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 C2CD4DB7Z1M9 353 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 TMEM189-UBE2V1I3L0A0 370 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 ADAM12O43184 909 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 FAM189A1O60320 539 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 TOM1L1O75674 476 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 FAM13AO94988 1023 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 CASP1P29466 404 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 NMT1P30419 496 aaKnown RBP12.58□□□□□ -0.4
LINC00539-204ENST00000608957 MRE11P49959 708 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 CLCNKBP51801 687 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 SMTNP53814 917 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 AMPD3Q01432 767 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 ITIH3Q06033 890 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 MCL1Q07820 350 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 CUL4BQ13620 913 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 NOLC1Q14978 699 aaKnown RBP eCLIP12.58□□□□□ -0.4
LINC00539-204ENST00000608957 UPP1Q16831 310 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 SLC10A6Q3KNW5 377 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 USP41Q3LFD5 358 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 TMEM31Q5JXX7 168 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 ZBTB41Q5SVQ8 909 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 LILRA6Q6PI73 481 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 TMC5Q6UXY8 1006 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 C11orf57Q6ZUT1 292 aaPredicted RBP12.58□□□□□ -0.4
LINC00539-204ENST00000608957 SV2BQ7L1I2 683 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 PPFIBP1Q86W92 1011 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 KMT2EQ8IZD2 1858 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 MYCT1Q8N699 235 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 RNF214Q8ND24 703 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 RIN2Q8WYP3 895 aaPredicted RBP12.58□□□□□ -0.4
LINC00539-204ENST00000608957 C18orf25Q96B23 403 aaPredicted RBP12.58□□□□□ -0.4
LINC00539-204ENST00000608957 CCDC94Q9BW85 323 aaPredicted RBP12.58□□□□□ -0.4
LINC00539-204ENST00000608957 BLZF1Q9H2G9 400 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 IKZF4Q9H2S9 585 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 CNTN3Q9P232 1028 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 FNIP2Q9P278 1114 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 LARSQ9P2J5 1176 aaKnown RBP12.58□□□□□ -0.4
LINC00539-204ENST00000608957 ANKFY1Q9P2R3 1169 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 SF3B1O75533 1304 aaKnown RBP eCLIP12.58□□□□□ -0.4
LINC00539-204ENST00000608957 TRIOO75962 3097 aa12.58□□□□□ -0.4
LINC00539-204ENST00000608957 K7ENM7 598 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 RFPL2O75678 378 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 PIGRP01833 764 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
LINC00539-204ENST00000608957 SPATA31D3P0C874 917 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 KCNE1P15382 129 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 TNFSF9P41273 254 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 BRCC3P46736 316 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 STRN3Q13033 797 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 MORC3Q14149 939 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 FAM171A1Q5VUB5 890 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 ZPBP2Q6X784 338 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 SPATA31D4Q6ZUB0 917 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 DYMQ7RTS9 669 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 GPR149Q86SP6 731 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 PALB2Q86YC2 1186 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 GPR65Q8IYL9 337 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 LNX1Q8TBB1 728 aaPredicted RBP12.57□□□□□ -0.4
LINC00539-204ENST00000608957 PIK3R5Q8WYR1 880 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 DNAJC19Q96DA6 116 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 ACAP3Q96P50 834 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 GSDMAQ96QA5 445 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 C7orf25Q9BPX7 421 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 CLSTN3Q9BQT9 956 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 TRIM9Q9C026 710 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 LRRC27Q9C0I9 530 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 NAT10Q9H0A0 1025 aaKnown RBP12.57□□□□□ -0.4
LINC00539-204ENST00000608957 SFXN1Q9H9B4 322 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 PARVGQ9HBI0 331 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 RMND1Q9NWS8 449 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 TBX20Q9UMR3 447 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 SSX2IPQ9Y2D8 614 aa12.57□□□□□ -0.4
LINC00539-204ENST00000608957 TISP43B9A030 160 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 ANKRD63C9JTQ0 380 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 I3L4J1 428 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 TGM5O43548 720 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 PAPLNO95428 1278 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 GLUD1P00367 558 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 ADH1AP07327 375 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 CXCL8P10145 99 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 ALADP13716 330 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 FGFR3P22607 806 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 MTHFRP42898 656 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 ZNF165P49910 485 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 ZC2HC1CQ53FD0 456 aaPredicted RBP12.56□□□□□ -0.4
LINC00539-204ENST00000608957 ISM2Q6H9L7 571 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 CES5AQ6NT32 575 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 RSPO2Q6UXX9 243 aaPredicted RBP12.56□□□□□ -0.4
LINC00539-204ENST00000608957 APBB1IPQ7Z5R6 666 aaPredicted RBP12.56□□□□□ -0.4
LINC00539-204ENST00000608957 SFR1Q86XK3 245 aa12.56□□□□□ -0.4
LINC00539-204ENST00000608957 CEP57Q86XR8 500 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms