RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RPL21P46778 160 aaKnown RBP12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 GPC3P51654 580 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 DYNLT1P63172 113 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 CAPSQ13938 189 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 DCUN1D2Q6PH85 259 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 TMC3Q7Z5M5 1100 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 RASGEF1CQ8N431 466 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 SLC17A8Q8NDX2 589 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 SPIRE2Q8WWL2 714 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 SPATA33Q96N06 139 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 GTF3C4Q9UKN8 822 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 NUB1Q9Y5A7 615 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 SNCAIPQ9Y6H5 919 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 MIF4GDA9UHW6 222 aaKnown RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 CST3P01034 146 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 CYP4A22Q5TCH4 519 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 SLC13A5Q86YT5 568 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 C12orf56Q8IXR9 622 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 SAMD3Q8N6K7 520 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 MFSD14AQ96MC6 490 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 SEMA4AQ9H3S1 761 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 CHST7Q9NS84 486 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 ARHGAP28Q9P2N2 729 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 FOXO6A8MYZ6 492 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 EIF3HO15372 352 aaKnown RBP eCLIP12.3□□□□□ -0.447e-8■■□□□ 13.9
ARHGEF1-220ENST00000600274 B4GALT5O43286 388 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 PHF2O75151 1096 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 ARIH2O95376 493 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 HSPA9P38646 679 aaKnown RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 RAP1GAPP47736 663 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 MYL6P60660 151 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 IFT88Q13099 833 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 SLC29A2Q14542 456 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 JPH2Q9BR39 696 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 PNMA2Q9UL42 364 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 TTC7AQ9ULT0 858 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 GOLGA6L7A0A1B0GV03 622 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 TLR3O15455 904 aaKnown RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 STBD1O95210 358 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 IFNB1P01574 187 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 KRT10P13645 584 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 ADCY8P40145 1251 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 KCTD2Q14681 263 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 CLEC16AQ2KHT3 1053 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 MSL3Q8N5Y2 521 aaKnown RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 SYNCQ9H7C4 482 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 MTRF1LQ9UGC7 380 aaKnown RBP12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 TBK1Q9UHD2 729 aa12.3□□□□□ -0.44
ARHGEF1-220ENST00000600274 CAND2O75155 1236 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 ECEL1O95672 775 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 CYP2C8P10632 490 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 GTF2H1P32780 548 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 LSP1P33241 339 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 PMS2P54278 862 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 KRT17Q04695 432 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 CUL2Q13617 745 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 Q3C1V9 767 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 XRRA1Q6P2D8 792 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.29□□□□□ -0.449e-7■■■■□ 21.4
ARHGEF1-220ENST00000600274 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 PSPC1Q8WXF1 523 aaKnown RBP12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 SH3GL2Q99962 352 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 ASCC2Q9H1I8 757 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 PORCNQ9H237 461 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 RALAP11233 206 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 GARTP22102 1010 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 TNFRSF8P28908 595 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 ZNF568Q3ZCX4 644 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 LIN9Q5TKA1 542 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 FAM160B1Q5W0V3 765 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 C1orf131Q8NDD1 294 aaKnown RBP12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 RDM1Q8NG50 284 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 SEPT1Q8WYJ6 367 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 ST6GALNAC4Q9H4F1 302 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 TXNRD2Q9NNW7 524 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 PCDHB2Q9Y5E7 798 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
ARHGEF1-220ENST00000600274 FARP2O94887 1054 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 VNN1O95497 513 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 GZMAP12544 262 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 CORO7P57737 925 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 MCOLN2Q8IZK6 566 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 RUBCNQ92622 972 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 A0A087WUV0 522 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 CES2O00748 559 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 PRKCBP05771 671 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 TXNP10599 105 aaKnown RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 COILP38432 576 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 CDH8P55286 799 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 RPL7AP62424 266 aaKnown RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 TMEM62Q0P6H9 643 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 ZACNQ401N2 412 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms