RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 ZFHX2Q9C0A1 2572 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-237ENST00000592234 RPL9P32969 192 aaKnown RBP20.05■□□□□ 0.8
CIRBP-237ENST00000592234 MATR3P43243 847 aaKnown RBP eCLIP20.05■□□□□ 0.8
CIRBP-237ENST00000592234 PABPC1LQ4VXU2 614 aaKnown RBP20.05■□□□□ 0.8
CIRBP-237ENST00000592234 VARS2Q5ST30 1063 aaKnown RBP20.05■□□□□ 0.8
CIRBP-237ENST00000592234 PARM1Q6UWI2 310 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 MTSS1LQ765P7 747 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 DTWD2Q8NBA8 298 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 FGF14Q92915 247 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 C18orf25Q96B23 403 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-237ENST00000592234 TBC1D17Q9HA65 648 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 ARHGEF3Q9NR81 526 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 SLC2A4RGQ9NR83 387 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 FOXD4L1Q9NU39 408 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 HCFC1R1Q9NWW0 138 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 MIA3Q5JRA6 1907 aa20.05■□□□□ 0.8
CIRBP-237ENST00000592234 SYN3O14994 580 aa20.04■□□□□ 0.8
CIRBP-237ENST00000592234 MAPTP10636 758 aaKnown RBP20.04■□□□□ 0.8
CIRBP-237ENST00000592234 ELF1P32519 619 aa20.04■□□□□ 0.8
CIRBP-237ENST00000592234 ROR1Q01973 937 aa20.04■□□□□ 0.8
CIRBP-237ENST00000592234 CACNB1Q02641 598 aaPredicted RBP20.04■□□□□ 0.8
CIRBP-237ENST00000592234 ANGPT1Q15389 498 aa20.04■□□□□ 0.8
CIRBP-237ENST00000592234 TMEM119Q4V9L6 283 aa20.04■□□□□ 0.8
CIRBP-237ENST00000592234 SEZ6Q53EL9 994 aa20.04■□□□□ 0.8
CIRBP-237ENST00000592234 ITFG1Q8TB96 612 aa20.04■□□□□ 0.8
CIRBP-237ENST00000592234 RPP25Q9BUL9 199 aaKnown RBP20.04■□□□□ 0.8
CIRBP-237ENST00000592234 LARSQ9P2J5 1176 aaKnown RBP20.04■□□□□ 0.8
CIRBP-237ENST00000592234 DNMT3BQ9UBC3 853 aaKnown RBP20.04■□□□□ 0.8
CIRBP-237ENST00000592234 NPHP3-ACAD11A0A0J9YXS1 232 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-237ENST00000592234 H0YCG3 227 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 H7C4K7 107 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 CLDN3O15551 220 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 LRG1P02750 347 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 ARPP19P56211 112 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 SLC10A6Q3KNW5 377 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 SLC8B1Q6J4K2 584 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 ZPBP2Q6X784 338 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 FRMD5Q7Z6J6 570 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 ZNF461Q8TAF7 563 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 BICD1Q96G01 975 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 CALML4Q96GE6 196 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 AK8Q96MA6 479 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 KCNH3Q9ULD8 1083 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 VPS13AQ96RL7 3174 aa20.03■□□□□ 0.8
CIRBP-237ENST00000592234 DMDP11532 3685 aa20.02■□□□□ 0.8
CIRBP-237ENST00000592234 WDR27A2RRH5 827 aa20.02■□□□□ 0.8
CIRBP-237ENST00000592234 MEFVO15553 781 aaPredicted RBP20.02■□□□□ 0.8
CIRBP-237ENST00000592234 MCM4P33991 863 aa20.02■□□□□ 0.8
CIRBP-237ENST00000592234 NCKAP1LP55160 1127 aa20.02■□□□□ 0.8
CIRBP-237ENST00000592234 MCL1Q07820 350 aa20.02■□□□□ 0.8
CIRBP-237ENST00000592234 CUL4AQ13619 759 aa20.02■□□□□ 0.8
CIRBP-237ENST00000592234 PHLDB3Q6NSJ2 640 aa20.02■□□□□ 0.8
CIRBP-237ENST00000592234 ASCL5Q7RTU5 278 aa20.02■□□□□ 0.8
CIRBP-237ENST00000592234 MRPS23Q9Y3D9 190 aaKnown RBP20.02■□□□□ 0.8
CIRBP-237ENST00000592234 PRR23AA6NEV1 266 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 PRRG1O14668 218 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 SLC26A4O43511 780 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 ABLIM3O94929 683 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 CXCL8P10145 99 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 UBA7P41226 1012 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 GPC5P78333 572 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 DHX8Q14562 1220 aaKnown RBP20.01■□□□□ 0.79
CIRBP-237ENST00000592234 CTXN3Q4LDR2 81 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 SPECC1Q5M775 1068 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 HAUS6Q7Z4H7 955 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 NPAS3Q8IXF0 933 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 ING5Q8WYH8 240 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 NKD2Q969F2 451 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-237ENST00000592234 SUSD3Q96L08 255 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 TUBGCP4Q9UGJ1 667 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 FBXL5Q9UKA1 691 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 ODF2LQ9ULJ1 636 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 SIT1Q9Y3P8 196 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 CFAP54Q96N23 3096 aa20.01■□□□□ 0.79
CIRBP-237ENST00000592234 PTPRZ1P23471 2315 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-237ENST00000592234 ARHGEF37A1IGU5 675 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 TBC1D4O60343 1298 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 RHOP08100 348 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 CLTAP09496 248 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 ATF2P15336 505 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 PTPN2P17706 415 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 MRPL58Q14197 206 aaKnown RBP20■□□□□ 0.79
CIRBP-237ENST00000592234 ZNF280DQ6N043 979 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 GPBP1Q86WP2 473 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 APPL2Q8NEU8 664 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 RASSF8Q8NHQ8 419 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 SHDQ96IW2 340 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 KXD1Q9BQD3 176 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 REEP2Q9BRK0 252 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 PLEKHA5Q9HAU0 1116 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 CYP4F11Q9HBI6 524 aa20■□□□□ 0.79
CIRBP-237ENST00000592234 K7ENM7 598 aa19.99■□□□□ 0.79
CIRBP-237ENST00000592234 FAM13AO94988 1023 aa19.99■□□□□ 0.79
CIRBP-237ENST00000592234 BMP15O95972 392 aa19.99■□□□□ 0.79
CIRBP-237ENST00000592234 DCNP07585 359 aaKnown RBP19.99■□□□□ 0.79
CIRBP-237ENST00000592234 MARCKSP29966 332 aaPredicted RBP19.99■□□□□ 0.79
CIRBP-237ENST00000592234 LIG4P49917 911 aa19.99■□□□□ 0.79
CIRBP-237ENST00000592234 SPAG1Q07617 926 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms