RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ARL6IP4Q66PJ3 421 aaKnown RBP19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 PARM1Q6UWI2 310 aa19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 ITFG1Q8TB96 612 aa19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 FGF14Q92915 247 aa19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 ZBTB45Q96K62 511 aaPredicted RBP19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 RPP25Q9BUL9 199 aaKnown RBP19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 ARHGEF3Q9NR81 526 aa19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 CNTN3Q9P232 1028 aa19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 KCNH3Q9ULD8 1083 aa19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 FAM186AA6NE01 2351 aa19.62■□□□□ 0.73
PRKCSH-211ENST00000590098 PDCD11Q14690 1871 aaKnown RBP19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 ABLIM1O14639 778 aa19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 MATR3P43243 847 aaKnown RBP eCLIP19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 NOLC1Q14978 699 aaKnown RBP eCLIP19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 PHLDB3Q6NSJ2 640 aa19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 ZPBP2Q6X784 338 aa19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 FRMD5Q7Z6J6 570 aa19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 TMEM161BQ8NDZ6 487 aa19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 ZNF461Q8TAF7 563 aa19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 C18orf25Q96B23 403 aaPredicted RBP19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 HCFC1R1Q9NWW0 138 aa19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 DNMT3BQ9UBC3 853 aaKnown RBP19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 NOTCH4Q99466 2003 aa19.61■□□□□ 0.73
PRKCSH-211ENST00000590098 H0YCG3 227 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 H7C4K7 107 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 PRRG1O14668 218 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 SYN3O14994 580 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 CLDN3O15551 220 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 MAPTP10636 758 aaKnown RBP19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 MCM2P49736 904 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 SLC12A3P55017 1021 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 ARPP19P56211 112 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 GPC5P78333 572 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 ROR1Q01973 937 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 SLC8B1Q6J4K2 584 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 NKD2Q969F2 451 aaPredicted RBP19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 BICD1Q96G01 975 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 SHDQ96IW2 340 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 LARSQ9P2J5 1176 aaKnown RBP19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 SMC3Q9UQE7 1217 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 MRPS23Q9Y3D9 190 aaKnown RBP19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 SIT1Q9Y3P8 196 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 SPTBN4Q9H254 2564 aa19.6■□□□□ 0.73
PRKCSH-211ENST00000590098 PRR23AA6NEV1 266 aa19.59■□□□□ 0.73
PRKCSH-211ENST00000590098 LRG1P02750 347 aa19.59■□□□□ 0.73
PRKCSH-211ENST00000590098 SLC10A6Q3KNW5 377 aa19.59■□□□□ 0.73
PRKCSH-211ENST00000590098 SEZ6Q53EL9 994 aa19.59■□□□□ 0.73
PRKCSH-211ENST00000590098 SPECC1Q5M775 1068 aa19.59■□□□□ 0.73
PRKCSH-211ENST00000590098 CALML4Q96GE6 196 aa19.59■□□□□ 0.73
PRKCSH-211ENST00000590098 AK8Q96MA6 479 aa19.59■□□□□ 0.73
PRKCSH-211ENST00000590098 NPHP3-ACAD11A0A0J9YXS1 232 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 SLC26A4O43511 780 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 ABLIM3O94929 683 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 PTPN2P17706 415 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 MCM4P33991 863 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 UBA7P41226 1012 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 MCL1Q07820 350 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 CTXN3Q4LDR2 81 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 TMEM119Q4V9L6 283 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 LARP1BQ659C4 914 aaKnown RBP19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 NPAS3Q8IXF0 933 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 APPL2Q8NEU8 664 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 ING5Q8WYH8 240 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 SUSD3Q96L08 255 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 CYP4F11Q9HBI6 524 aa19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.58■□□□□ 0.72
PRKCSH-211ENST00000590098 ARHGEF37A1IGU5 675 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 WDR27A2RRH5 827 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 CD2BP2O95400 341 aaKnown RBP19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 DCNP07585 359 aaKnown RBP19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 RHOP08100 348 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 CLTAP09496 248 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 ATF2P15336 505 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 MARCKSP29966 332 aaPredicted RBP19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 PFKPQ01813 784 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 MRPL58Q14197 206 aaKnown RBP19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 ARSHQ5FYA8 562 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 TPGS2Q68CL5 300 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 TBC1D32Q96NH3 1257 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 PLEKHA5Q9HAU0 1116 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 GDE1Q9NZC3 331 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 FBXL5Q9UKA1 691 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 ODF2LQ9ULJ1 636 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 MIA3Q5JRA6 1907 aa19.57■□□□□ 0.72
PRKCSH-211ENST00000590098 MEFVO15553 781 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 TBC1D4O60343 1298 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 CXCL8P10145 99 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 LIG4P49917 911 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 NCKAP1LP55160 1127 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 STARD6P59095 220 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 SNW1Q13573 536 aaKnown RBP19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 DHX8Q14562 1220 aaKnown RBP19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 KYAT1Q16773 422 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 ZNF280DQ6N043 979 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 HAUS6Q7Z4H7 955 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 GPBP1Q86WP2 473 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 TCEAL8Q8IYN2 117 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 RASSF8Q8NHQ8 419 aa19.56■□□□□ 0.72
PRKCSH-211ENST00000590098 DDX12PQ92771 950 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms