RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 GLYCTKQ8IVS8 523 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 FSIP1Q8NA03 581 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 SLC22A17Q8WUG5 538 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 POP1Q99575 1024 aaKnown RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 RXFP1Q9HBX9 757 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 PRKAG3Q9UGI9 489 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 USP25Q9UHP3 1055 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 UBQLN1Q9UMX0 589 aaKnown RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 STYXL1Q9Y6J8 313 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 BDP1A6H8Y1 2624 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 I3L4J1 428 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 TULP1O00294 542 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-207ENST00000587256 RPL17P18621 184 aaKnown RBP16.11■□□□□ 0.17
ATG4D-207ENST00000587256 MCM4P33991 863 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 SYKP43405 635 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 BRCC3P46736 316 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 ZP2Q05996 745 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 CUL4BQ13620 913 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 RARS2Q5T160 578 aaKnown RBP16.11■□□□□ 0.17
ATG4D-207ENST00000587256 CES5AQ6NT32 575 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 ADHFE1Q8IWW8 467 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 CD302Q8IX05 232 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 GPR65Q8IYL9 337 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 GJD3Q8N144 294 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 GLIS3Q8NEA6 775 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 NOC3LQ8WTT2 800 aaKnown RBP16.11■□□□□ 0.17
ATG4D-207ENST00000587256 PIK3R5Q8WYR1 880 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 SAAL1Q96ER3 474 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 SFXN1Q9H9B4 322 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 MAN1C1Q9NR34 630 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 HPSEQ9Y251 543 aa16.11■□□□□ 0.17
ATG4D-207ENST00000587256 A0A1W2PQ27 194 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 A0A1W2PQ64 194 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 A0A1W2PQD8 194 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 EIF3DO15371 548 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATG4D-207ENST00000587256 NFICP08651 508 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 IGFBP6P24592 240 aaPredicted RBP16.1■□□□□ 0.17
ATG4D-207ENST00000587256 TKTP29401 623 aaKnown RBP16.1■□□□□ 0.17
ATG4D-207ENST00000587256 ADSSP30520 456 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 NDUFA8P51970 172 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 ITIH3Q06033 890 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 CBX2Q14781 532 aaPredicted RBP16.1■□□□□ 0.17
ATG4D-207ENST00000587256 TMEM132DQ14C87 1099 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 JADE1Q6IE81 842 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 ARMCX5Q6P1M9 558 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 PALB2Q86YC2 1186 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 C12orf76Q8N812 135 aaPredicted RBP16.1■□□□□ 0.17
ATG4D-207ENST00000587256 BEST2Q8NFU1 509 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 PAGE5Q96GU1 130 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 TSPAN18Q96SJ8 248 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 FAM213AQ9BRX8 229 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 S1PR5Q9H228 398 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 EXOC1Q9NV70 894 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 FNIP2Q9P278 1114 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 DPP7Q9UHL4 492 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 UBE4BO95155 1302 aa16.1■□□□□ 0.17
ATG4D-207ENST00000587256 PVALEFA0A1B0GWK0 134 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 GOLGA6L4A6NEF3 574 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 CYP3A5P20815 502 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 GARTP22102 1010 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 FGFR3P22607 806 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 GUCY2FP51841 1108 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 CD300LGQ6UXG3 332 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 TMC5Q6UXY8 1006 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 LNX1Q8TBB1 728 aaPredicted RBP16.09■□□□□ 0.17
ATG4D-207ENST00000587256 SUSD6Q92537 303 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 CBWD1Q9BRT8 395 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 ADAM7Q9H2U9 754 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 ASB7Q9H672 318 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 CDH22Q9UJ99 828 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 TCHHQ07283 1943 aa16.09■□□□□ 0.17
ATG4D-207ENST00000587256 PLXNA3P51805 1871 aa16.08■□□□□ 0.17
ATG4D-207ENST00000587256 FAM237AA0A1B0GTK4 181 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 GOLGA8IPA6NC78 632 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 GOLGA8JA6NMD2 632 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 IL18RAPO95256 599 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 LDHAP00338 332 aaKnown RBP16.08■□□□□ 0.16
ATG4D-207ENST00000587256 ADRB2P07550 413 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 WEE2P0C1S8 567 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 LRPAP1P30533 357 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 ANP32AP39687 249 aaKnown RBP16.08■□□□□ 0.16
ATG4D-207ENST00000587256 ANKS3Q6ZW76 656 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 NELFCDQ8IXH7 590 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 TMEM130Q8N3G9 435 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 NECTIN4Q96NY8 510 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 PHF7Q9BWX1 381 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-207ENST00000587256 GOLPH3LQ9H4A5 285 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 PCIF1Q9H4Z3 704 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 SLC39A2Q9NP94 309 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 RBAKQ9NYW8 714 aaPredicted RBP16.08■□□□□ 0.16
ATG4D-207ENST00000587256 DERAQ9Y315 318 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 C2CD2Q9Y426 696 aa16.08■□□□□ 0.16
ATG4D-207ENST00000587256 VWA8A3KMH1 1905 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 SYN3O14994 580 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 KIAA0391O15091 583 aaKnown RBP16.07■□□□□ 0.16
ATG4D-207ENST00000587256 TGM5O43548 720 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 MYL1P05976 194 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms