RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 ZFP42Q96MM3 310 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PPP1R10Q96QC0 940 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GAD1Q99259 594 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 IMPG2Q9BZV3 1241 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CXCL16Q9H2A7 254 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GANQ9H2C0 597 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 SIX2Q9NPC8 291 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FAM207AQ9NSI2 230 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 APEX2Q9UBZ4 518 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ARL5CA6NH57 179 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CCDC85CA6NKD9 419 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TULP1O00294 542 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PHACTR2O75167 634 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GYPCP04921 128 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TPM1P09493 284 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 SLC9A1P19634 815 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FPGSQ05932 587 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 KLHDC7AQ5VTJ3 777 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GLB1LQ6UWU2 654 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 SPC24Q8NBT2 197 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RNF169Q8NCN4 708 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CXorf38Q8TB03 319 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 SEMA4DQ92854 862 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 NT5C1BQ96P26 610 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 EDEM3Q9BZQ6 932 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RNF19AQ9NV58 838 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 DPP3Q9NY33 737 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CEP72Q9P209 647 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TUBGCP4Q9UGJ1 667 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 SIX4Q9UIU6 781 aa18.03■□□□□ 0.48
CDK5RAP3-230ENST00000584042 EPHB6O15197 1021 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 EVI5O60447 810 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 NOL4O94818 638 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 STAU1O95793 577 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ASS1P00966 412 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ACTN1P12814 892 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 SCNN1GP51170 649 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GSDMDP57764 484 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 NOP14P78316 857 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TRPC3Q13507 836 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FNDC1Q4ZHG4 1894 aaPredicted RBP18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CLLU1OSQ5K130 101 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PPFIBP1Q86W92 1011 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TNS4Q8IZW8 715 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CRIPAKQ8N1N5 446 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CCDC150Q8NCX0 1101 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 URGCPQ8TCY9 931 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TAF4BQ92750 862 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FAM81BQ96LP2 452 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 VRTNQ9H8Y1 702 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 LRFN2Q9ULH4 789 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PCDHB7Q9Y5E2 793 aa18.02■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PTPRSQ13332 1948 aa18.02■□□□□ 0.47
CDK5RAP3-230ENST00000584042 MFAP3LO75121 409 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 OFD1O75665 1012 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ITGB3P05106 788 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 THP07101 528 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 UCHL3P15374 230 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LRPAP1P30533 357 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 POLR2BP30876 1174 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ATICP31939 592 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 NAB2Q15742 525 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PSRC1Q6PGN9 363 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CNGA4Q8IV77 575 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LRRC52Q8N7C0 313 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 BADQ92934 168 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 FAXDC2Q96IV6 333 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ZNF560Q96MR9 790 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CAPN11Q9UMQ6 739 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PLAGL2Q9UPG8 496 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 COL4A6Q14031 1691 aa18.01■□□□□ 0.47
CDK5RAP3-230ENST00000584042 IBSPP21815 317 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 RBP5P82980 135 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 GCNT1Q02742 428 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SOX4Q06945 474 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SGSM1Q2NKQ1 1148 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ZNF699Q32M78 642 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 WDR44Q5JSH3 913 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SMYD5Q6GMV2 418 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ABI1Q8IZP0 508 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 HELQQ8TDG4 1101 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 C18orf25Q96B23 403 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 NAA15Q9BXJ9 866 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 MRPL9Q9BYD2 267 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 XYLT2Q9H1B5 865 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 KANSL3Q9P2N6 904 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 MYO6Q9UM54 1294 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 R3HCC1Q9Y3T6 440 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 FHOD1Q9Y613 1164 aa18■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ANO9A1A5B4 782 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LRRN2O75325 713 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 AMHP03971 560 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 KRT19P08727 400 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 FGFR1P11362 822 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CASP14P31944 242 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PNPLA4P41247 253 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 FXR1P51114 621 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 GUCY2FP51841 1108 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 MYL6P60660 151 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 POLR2FP61218 127 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms