RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 UBA7P41226 1012 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 MCM2P49736 904 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 CLCN5P51795 746 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 NCKAP1LP55160 1127 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 MCL1Q07820 350 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 SLC5A9Q2M3M2 681 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 PDXDC1Q6P996 788 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 ANKS3Q6ZW76 656 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 HAUS6Q7Z4H7 955 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 BICD1Q96G01 975 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 EPSTI1Q96J88 318 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 SLC38A7Q9NVC3 462 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.15□□□□□ -0.465e-13■■□□□ 11.6
PPP4R1-218ENST00000580745 NUB1Q9Y5A7 615 aa12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 TIMM13Q9Y5L4 95 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-218ENST00000580745 LACTBL1A8MY62 500 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 K7ENM7 598 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 PPEF2O14830 753 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 CLDN3O15551 220 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 XYLBO75191 536 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 FAM13AO94988 1023 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 SRFP11831 508 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 MARCKSP29966 332 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 NMT1P30419 496 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 MCM4P33991 863 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 GPC5P78333 572 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 CUL4AQ13619 759 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 MRPL58Q14197 206 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 PABPC1LQ4VXU2 614 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 SLC8B1Q6J4K2 584 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 SLC39A4Q6P5W5 647 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 ZPBP2Q6X784 338 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 RASSF8Q8NHQ8 419 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 RAD54LQ92698 747 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 MCRS1Q96EZ8 462 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 CALML4Q96GE6 196 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 AK8Q96MA6 479 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 CLIC6Q96NY7 704 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 FIZ1Q96SL8 496 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 KXD1Q9BQD3 176 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 TBC1D17Q9HA65 648 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 WNT16Q9UBV4 365 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 FBXL5Q9UKA1 691 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
PPP4R1-218ENST00000580745 PLXNA3P51805 1871 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 TTC26A0AVF1 554 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 ANKRD63C9JTQ0 380 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 SYN3O14994 580 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 FAM189A1O60320 539 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 GFRA3O60609 400 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 LRRN2O75325 713 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 ABLIM3O94929 683 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 KRT18P05783 430 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 DCNP07585 359 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 RHOP08100 348 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 OR4Q2P0C623 313 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 CEBPBP17676 345 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 HOXA9P31269 272 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 RPL9P32969 192 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 LIG4P49917 911 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 CDR1P51861 262 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 ZNF131P52739 623 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 CEBPZQ03701 1054 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 PTPAQ15257 358 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 ENOX2Q16206 610 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 UVSSAQ2YD98 709 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 CTXN3Q4LDR2 81 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 ZC2HC1CQ53FD0 456 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 ASCL5Q7RTU5 278 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 BRAPQ7Z569 592 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 FRMD5Q7Z6J6 570 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 NPAS3Q8IXF0 933 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 DTWD2Q8NBA8 298 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 DDX12PQ92771 950 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 TCEAL4Q96EI5 215 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 FAM212AQ96EL1 285 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 KIF12Q96FN5 646 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 SUSD3Q96L08 255 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 PLA2G2FQ9BZM2 168 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 FOXQ1Q9C009 403 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 CYP4F11Q9HBI6 524 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 ARHGEF3Q9NR81 526 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 KCND2Q9NZV8 630 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 LARSQ9P2J5 1176 aaKnown RBP12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 ODF2LQ9ULJ1 636 aa12.13□□□□□ -0.47
PPP4R1-218ENST00000580745 PRRG1O14668 218 aa12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 HNRNPDLO14979 420 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 TRAK2O60296 914 aa12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 CLTAP09496 248 aa12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 LONP1P36776 959 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 CCR2P41597 374 aa12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 NUBP1P53384 320 aa12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 RESTQ13127 1097 aa12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 ZBTB6Q15916 424 aa12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
PPP4R1-218ENST00000580745 CCDC105Q8IYK2 499 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms