RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SECISBP2LQ93073 1101 aaKnown RBP21.78■■□□□ 1.08
SMG8-203ENST00000578922 SPC25Q9HBM1 224 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 VPS18Q9P253 973 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 SMIM35A0A1B0GVV1 85 aa21.77■■□□□ 1.08
SMG8-203ENST00000578922 PHACTR2O75167 634 aa21.77■■□□□ 1.08
SMG8-203ENST00000578922 GPR32O75388 356 aa21.77■■□□□ 1.08
SMG8-203ENST00000578922 CXCL8P10145 99 aa21.77■■□□□ 1.08
SMG8-203ENST00000578922 AARSP49588 968 aaKnown RBP eCLIP21.77■■□□□ 1.08
SMG8-203ENST00000578922 ADAM17P78536 824 aa21.77■■□□□ 1.08
SMG8-203ENST00000578922 ZNF410Q86VK4 478 aa21.77■■□□□ 1.08
SMG8-203ENST00000578922 RUBCNQ92622 972 aa21.77■■□□□ 1.08
SMG8-203ENST00000578922 XPNPEP3Q9NQH7 507 aa21.77■■□□□ 1.08
SMG8-203ENST00000578922 CWC15Q9P013 229 aaKnown RBP21.77■■□□□ 1.08
SMG8-203ENST00000578922 PRLRP16471 622 aa21.77■■□□□ 1.07
SMG8-203ENST00000578922 DHX38Q92620 1227 aaKnown RBP21.77■■□□□ 1.07
SMG8-203ENST00000578922 PACSIN1Q9BY11 444 aa21.77■■□□□ 1.07
SMG8-203ENST00000578922 MTMR12Q9C0I1 747 aa21.77■■□□□ 1.07
SMG8-203ENST00000578922 JRKLQ9Y4A0 524 aa21.77■■□□□ 1.07
SMG8-203ENST00000578922 MFAP3P55082 362 aa21.76■■□□□ 1.07
SMG8-203ENST00000578922 ITIH3Q06033 890 aa21.76■■□□□ 1.07
SMG8-203ENST00000578922 MTG1Q9BT17 334 aaPredicted RBP21.76■■□□□ 1.07
SMG8-203ENST00000578922 GCOM2Q9BZD3 368 aaPredicted RBP21.76■■□□□ 1.07
SMG8-203ENST00000578922 TACC1O75410 805 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 STAG3L1P0CL83 205 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 MAP2K2P36507 400 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 TFAMQ00059 246 aaKnown RBP21.75■■□□□ 1.07
SMG8-203ENST00000578922 ZSCAN26Q16670 478 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 NBPF20Q3BBV1 942 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 FAM47CQ5HY64 1035 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 CCDC70Q6NSX1 233 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 GLYCTKQ8IVS8 523 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 RAET1EQ8TD07 263 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 ACP6Q9NPH0 428 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 C1orf112Q9NSG2 853 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 SEPT11Q9NVA2 429 aaKnown RBP21.75■■□□□ 1.07
SMG8-203ENST00000578922 LMAN1P49257 510 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 WDR44Q5JSH3 913 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 CATSPER4Q7RTX7 472 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 ZNF572Q7Z3I7 529 aaPredicted RBP21.75■■□□□ 1.07
SMG8-203ENST00000578922 SLC20A1Q8WUM9 679 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 UPF3AQ9H1J1 476 aaKnown RBP21.75■■□□□ 1.07
SMG8-203ENST00000578922 RPF1Q9H9Y2 349 aaKnown RBP21.75■■□□□ 1.07
SMG8-203ENST00000578922 DAAM1Q9Y4D1 1078 aa21.75■■□□□ 1.07
SMG8-203ENST00000578922 DDX3XO00571 662 aaKnown RBP eCLIP21.74■■□□□ 1.073e-6■■■□□ 15.8
SMG8-203ENST00000578922 HOXD10P28358 340 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 ACTN2P35609 894 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 WDR49Q8IV35 697 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 TMEM130Q8N3G9 435 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 LNX1Q8TBB1 728 aaPredicted RBP21.74■■□□□ 1.07
SMG8-203ENST00000578922 CAGE1Q8TC20 777 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 CFHR5Q9BXR6 569 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 CASP8AP2Q9UKL3 1982 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 CYP26A1O43174 497 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 ADAMTS4O75173 837 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 MCF2P10911 925 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 GYS2P54840 703 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 NCOA4Q13772 614 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 VPS36Q86VN1 386 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 EFCAB13Q8IY85 973 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 U2AF1L4Q8WU68 220 aaKnown RBP21.74■■□□□ 1.07
SMG8-203ENST00000578922 TMEM40Q8WWA1 233 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 NAGPAQ9UK23 515 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 FAN1Q9Y2M0 1017 aa21.74■■□□□ 1.07
SMG8-203ENST00000578922 TMCO5BA8MYB1 307 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 TULP2O00295 520 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 KPNA6O60684 536 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 SRGAP2O75044 1071 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 RPS6KA5O75582 802 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 SGPL1O95470 568 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 CST3P01034 146 aaPredicted RBP21.73■■□□□ 1.07
SMG8-203ENST00000578922 CCDC172P0C7W6 258 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 ALKBH5Q6P6C2 394 aaKnown RBP21.73■■□□□ 1.07
SMG8-203ENST00000578922 APOBEC3GQ9HC16 384 aaKnown RBP21.73■■□□□ 1.07
SMG8-203ENST00000578922 SALL4Q9UJQ4 1053 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 SNX12Q9UMY4 172 aa21.73■■□□□ 1.07
SMG8-203ENST00000578922 MEFVO15553 781 aaPredicted RBP21.72■■□□□ 1.07
SMG8-203ENST00000578922 MOCS3O95396 460 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 CALCAP01258 141 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 ASGR1P07306 291 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 GNAT1P11488 350 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 DARSP14868 501 aaKnown RBP21.72■■□□□ 1.07
SMG8-203ENST00000578922 KCNA10Q16322 511 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 OLIG1Q8TAK6 271 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 SHC3Q92529 594 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 UMODL1Q5DID0 1318 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 A0A1B0GUA9 196 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 HMGCRP04035 888 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 TMEM191BP0C7N4 346 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 KRT5P13647 590 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 DUOXA2Q1HG44 320 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 LEKR1Q6ZMV7 388 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 FAM71AQ8IYT1 594 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 MMGT1Q8N4V1 131 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 COG1Q8WTW3 980 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 CAPZA3Q96KX2 299 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 ADPGKQ9BRR6 497 aa21.72■■□□□ 1.07
SMG8-203ENST00000578922 LACTBL1A8MY62 500 aa21.71■■□□□ 1.07
SMG8-203ENST00000578922 BUB1O43683 1085 aa21.71■■□□□ 1.07
SMG8-203ENST00000578922 ZC3H11AO75152 810 aaKnown RBP eCLIP21.71■■□□□ 1.07
SMG8-203ENST00000578922 NPTXRO95502 500 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms