RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 REEP2Q9BRK0 252 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 BACH2Q9BYV9 841 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 WDR6Q9NNW5 1121 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 TDRD15B5MCY1 1934 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 WDFY4Q6ZS81 3184 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 K7ENM7 598 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 PODXLO00592 558 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 ABLIM1O14639 778 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 CLDN3O15551 220 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 KCNE1P15382 129 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 SCP2P22307 547 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 GBP2P32456 591 aaPredicted RBP13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 NCKAP1LP55160 1127 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 GRIN1Q05586 938 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 ARSHQ5FYA8 562 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 LILRA6Q6PI73 481 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 ALKAL1Q6UXT8 129 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 RAD54LQ92698 747 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZNF707Q96C28 371 aaPredicted RBP13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 PRKD2Q9BZL6 878 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 PARVGQ9HBI0 331 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 CNTN3Q9P232 1028 aa13.51□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZDBF2Q9HCK1 2354 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 HNRNPDLO14979 420 aaKnown RBP13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZMYND10O75800 440 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 SYT1P21579 422 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 FGFR3P22607 806 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 TKTP29401 623 aaKnown RBP13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 TXLNAP40222 546 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 LIG4P49917 911 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 SOX4Q06945 474 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 MCL1Q07820 350 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 RESTQ13127 1097 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 MCM6Q14566 821 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 GET4Q7L5D6 327 aaPredicted RBP13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 HAUS6Q7Z4H7 955 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 C3orf58Q8NDZ4 430 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 LARP4BQ92615 738 aaKnown RBP13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZMAT2Q96NC0 199 aaKnown RBP13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZHX3Q9H4I2 956 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 BLOC1S4Q9NUP1 217 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 MTRRQ9UBK8 725 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 NUB1Q9Y5A7 615 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
CTDNEP1-205ENST00000570828 PIEZO1Q92508 2521 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 I3L4J1 428 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 ADAM12O43184 909 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 PAPLNO95428 1278 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 C8AP07357 584 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 CLTAP09496 248 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 HNRNPA1P09651 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 CXCL8P10145 99 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 IGFBP6P24592 240 aaPredicted RBP13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 RPL9P32969 192 aaKnown RBP13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 OR1D2P34982 312 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 BRCC3P46736 316 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZNF131P52739 623 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 TDGQ13569 410 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 SEZ6Q53EL9 994 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 PPM1LQ5SGD2 360 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 LRRC15Q8TF66 581 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 KCNN1Q92952 543 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 C18orf25Q96B23 403 aaPredicted RBP13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 SMOC2Q9H3U7 446 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 IGSF9Q9P2J2 1179 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 TBX20Q9UMR3 447 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
CTDNEP1-205ENST00000570828 TRAK2O60296 914 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 N4BP1O75113 896 aaKnown RBP13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 XYLBO75191 536 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 HOXA9P31269 272 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 ABCD1P33897 745 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 CEBPZQ03701 1054 aaKnown RBP13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 RAB33AQ14088 237 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 PTPAQ15257 358 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 KYAT1Q16773 422 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 SLC10A6Q3KNW5 377 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 SPECC1Q5M775 1068 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 CD300LGQ6UXG3 332 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 SLC7A14Q8TBB6 771 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 EPSTI1Q96J88 318 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 MYADMQ96S97 322 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 PRRX2Q99811 253 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 MFSD1Q9H3U5 465 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 PLEKHA5Q9HAU0 1116 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 KCNK12Q9HB15 430 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 EPS15L1Q9UBC2 864 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms