RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 SOX4Q06945 474 aaPredicted RBP30.24■■■□□ 2.43
UBFD1-206ENST00000566669 ANGPT1Q15389 498 aa30.24■■■□□ 2.43
UBFD1-206ENST00000566669 TPGS2Q68CL5 300 aa30.24■■■□□ 2.43
UBFD1-206ENST00000566669 C3orf58Q8NDZ4 430 aa30.24■■■□□ 2.43
UBFD1-206ENST00000566669 APPL2Q8NEU8 664 aa30.24■■■□□ 2.43
UBFD1-206ENST00000566669 NKD2Q969F2 451 aaPredicted RBP30.24■■■□□ 2.43
UBFD1-206ENST00000566669 TSPAN18Q96SJ8 248 aa30.24■■■□□ 2.43
UBFD1-206ENST00000566669 OXCT2Q9BYC2 517 aaPredicted RBP30.24■■■□□ 2.43
UBFD1-206ENST00000566669 SEMA4AQ9H3S1 761 aa30.24■■■□□ 2.43
UBFD1-206ENST00000566669 GDE1Q9NZC3 331 aa30.24■■■□□ 2.43
UBFD1-206ENST00000566669 CA14Q9ULX7 337 aa30.24■■■□□ 2.43
UBFD1-206ENST00000566669 ARHGEF37A1IGU5 675 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 ABLIM3O94929 683 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 PLA2G4BP0C869 781 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 SLC12A3P55017 1021 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 MCL1Q07820 350 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 VARS2Q5ST30 1063 aaKnown RBP30.23■■■□□ 2.43
UBFD1-206ENST00000566669 CALML4Q96GE6 196 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 ZMAT2Q96NC0 199 aaKnown RBP30.23■■■□□ 2.43
UBFD1-206ENST00000566669 ANKFY1Q9P2R3 1169 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 SMC3Q9UQE7 1217 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 SIT1Q9Y3P8 196 aa30.23■■■□□ 2.43
UBFD1-206ENST00000566669 VWA8A3KMH1 1905 aa30.22■■■□□ 2.43
UBFD1-206ENST00000566669 SFI1A8K8P3 1242 aa30.22■■■□□ 2.43
UBFD1-206ENST00000566669 LRG1P02750 347 aa30.22■■■□□ 2.43
UBFD1-206ENST00000566669 ATF2P15336 505 aa30.22■■■□□ 2.43
UBFD1-206ENST00000566669 BRCC3P46736 316 aa30.22■■■□□ 2.43
UBFD1-206ENST00000566669 TMEM119Q4V9L6 283 aa30.22■■■□□ 2.43
UBFD1-206ENST00000566669 SUSD3Q96L08 255 aa30.22■■■□□ 2.43
UBFD1-206ENST00000566669 PNMA5Q96PV4 448 aa30.22■■■□□ 2.43
UBFD1-206ENST00000566669 MRPS23Q9Y3D9 190 aaKnown RBP30.22■■■□□ 2.43
UBFD1-206ENST00000566669 PRR23AA6NEV1 266 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 PRRG1O14668 218 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 XPOTO43592 962 aaKnown RBP30.21■■■□□ 2.43
UBFD1-206ENST00000566669 CLTAP09496 248 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 UBA7P41226 1012 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 STARD6P59095 220 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 ROR1Q01973 937 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 PRKCQQ04759 706 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 MRPL58Q14197 206 aaKnown RBP30.21■■■□□ 2.43
UBFD1-206ENST00000566669 RSPO2Q6UXX9 243 aaPredicted RBP30.21■■■□□ 2.43
UBFD1-206ENST00000566669 TCEAL8Q8IYN2 117 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 FGF14Q92915 247 aa30.21■■■□□ 2.43
UBFD1-206ENST00000566669 DNMT3BQ9UBC3 853 aaKnown RBP30.21■■■□□ 2.43
UBFD1-206ENST00000566669 TBC1D4O60343 1298 aa30.2■■■□□ 2.43
UBFD1-206ENST00000566669 MICAL2O94851 1124 aa30.2■■■□□ 2.43
UBFD1-206ENST00000566669 PTPN2P17706 415 aa30.2■■■□□ 2.43
UBFD1-206ENST00000566669 NTHL1P78549 312 aa30.2■■■□□ 2.43
UBFD1-206ENST00000566669 ZNF280DQ6N043 979 aa30.2■■■□□ 2.43
UBFD1-206ENST00000566669 PARM1Q6UWI2 310 aa30.2■■■□□ 2.43
UBFD1-206ENST00000566669 BRAPQ7Z569 592 aa30.2■■■□□ 2.43
UBFD1-206ENST00000566669 I3L4J1 428 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 ZNF197O14709 1029 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 HARSP12081 509 aaKnown RBP30.19■■■□□ 2.42
UBFD1-206ENST00000566669 PAX3P23760 479 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 NCKAP1LP55160 1127 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 RAD51AP2Q09MP3 1159 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 SLC10A6Q3KNW5 377 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 NPAS3Q8IXF0 933 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 ELMOD1Q8N336 334 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 ITFG1Q8TB96 612 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 BICD1Q96G01 975 aa30.19■■■□□ 2.42
UBFD1-206ENST00000566669 CYP3A5P20815 502 aa30.18■■■□□ 2.42
UBFD1-206ENST00000566669 MARCKSP29966 332 aaPredicted RBP30.18■■■□□ 2.42
UBFD1-206ENST00000566669 MCM4P33991 863 aa30.18■■■□□ 2.42
UBFD1-206ENST00000566669 MATR3P43243 847 aaKnown RBP eCLIP30.18■■■□□ 2.42
UBFD1-206ENST00000566669 CTXN3Q4LDR2 81 aa30.18■■■□□ 2.42
UBFD1-206ENST00000566669 LARP1BQ659C4 914 aaKnown RBP30.18■■■□□ 2.42
UBFD1-206ENST00000566669 FRMD5Q7Z6J6 570 aa30.18■■■□□ 2.42
UBFD1-206ENST00000566669 ZBTB45Q96K62 511 aaPredicted RBP30.18■■■□□ 2.42
UBFD1-206ENST00000566669 PTPRZ1P23471 2315 aaPredicted RBP30.17■■■□□ 2.42
UBFD1-206ENST00000566669 ECI2O75521 394 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 RHOP08100 348 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 IGFBP6P24592 240 aaPredicted RBP30.17■■■□□ 2.42
UBFD1-206ENST00000566669 LONP1P36776 959 aaKnown RBP30.17■■■□□ 2.42
UBFD1-206ENST00000566669 GPC5P78333 572 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 HAUS6Q7Z4H7 955 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 LEMD2Q8NC56 503 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 C18orf25Q96B23 403 aaPredicted RBP30.17■■■□□ 2.42
UBFD1-206ENST00000566669 BORCS6Q96GS4 357 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 OSBPL6Q9BZF3 934 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 FBXL5Q9UKA1 691 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 UBQLN1Q9UMX0 589 aaKnown RBP30.17■■■□□ 2.42
UBFD1-206ENST00000566669 PCDHB8Q9UN66 801 aa30.17■■■□□ 2.42
UBFD1-206ENST00000566669 RIF1Q5UIP0 2472 aaKnown RBP30.17■■■□□ 2.42
UBFD1-206ENST00000566669 TRIP11Q15643 1979 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 WDR27A2RRH5 827 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 LRPAP1P30533 357 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 MAGEA9P43362 315 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 LIG4P49917 911 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 ZC3H14Q6PJT7 736 aaKnown RBP30.16■■■□□ 2.42
UBFD1-206ENST00000566669 ASCL5Q7RTU5 278 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 CD302Q8IX05 232 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 PJA1Q8NG27 643 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 TBC1D32Q96NH3 1257 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 PARVGQ9HBI0 331 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 CYP4F11Q9HBI6 524 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 HCFC1R1Q9NWW0 138 aa30.16■■■□□ 2.42
UBFD1-206ENST00000566669 AFF4Q9UHB7 1163 aaKnown RBP30.16■■■□□ 2.42
UBFD1-206ENST00000566669 CITO14578 2027 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms