RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PDXDC1Q6P996 788 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 C3orf58Q8NDZ4 430 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 HPS3Q969F9 1004 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 RIPOR3Q96MK2 946 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 PHF7Q9BWX1 381 aaPredicted RBP14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 S1PR5Q9H228 398 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 ADAM7Q9H2U9 754 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 TMEM206Q9H813 350 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 SFXN1Q9H9B4 322 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 RXFP1Q9HBX9 757 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 TUBGCP4Q9UGJ1 667 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 SERTAD1Q9UHV2 236 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 CDH22Q9UJ99 828 aa14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 UBQLN1Q9UMX0 589 aaKnown RBP14.11□□□□□ -0.15
CTDSPL2-209ENST00000560620 TTC26A0AVF1 554 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 FRMD3A2A2Y4 597 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 MEFVO15553 781 aaPredicted RBP14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 PRPF6O94906 941 aaKnown RBP14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 PFKFB1P16118 471 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 CMA1P23946 247 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 IGFBP6P24592 240 aaPredicted RBP14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 TKTP29401 623 aaKnown RBP14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 CASP1P29466 404 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 MTHFRP42898 656 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 NUCB2P80303 420 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 ATAT1Q5SQI0 421 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 JADE1Q6IE81 842 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 GRAMD1CQ8IYS0 662 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 BEST2Q8NFU1 509 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 PIK3R5Q8WYR1 880 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 SAAL1Q96ER3 474 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 FAM213AQ9BRX8 229 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 FGFBP2Q9BYJ0 223 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 GDPD2Q9HCC8 539 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 FNIP2Q9P278 1114 aa14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 CPSF3Q9UKF6 684 aaKnown RBP14.1□□□□□ -0.15
CTDSPL2-209ENST00000560620 TTC28Q96AY4 2481 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 GOLGA6L4A6NEF3 574 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 TGM5O43548 720 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 FAM189A1O60320 539 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 PPP1R37O75864 691 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 OR1D2P34982 312 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 TMEM132DQ14C87 1099 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 FAM26FQ5R3K3 315 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 ARMCX5Q6P1M9 558 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 ANKS3Q6ZW76 656 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 CD302Q8IX05 232 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 GPR65Q8IYL9 337 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 LNX1Q8TBB1 728 aaPredicted RBP14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 SUSD6Q92537 303 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 NECTIN4Q96NY8 510 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 C7orf25Q9BPX7 421 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 STRA6Q9BX79 667 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 PCIF1Q9H4Z3 704 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 PIDD1Q9HB75 910 aa14.09□□□□□ -0.15
CTDSPL2-209ENST00000560620 PLXNA3P51805 1871 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 PDCD11Q14690 1871 aaKnown RBP14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 TCHHQ07283 1943 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 MUC3AQ02505 3323 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 GOLGA8IPA6NC78 632 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 GOLGA8JA6NMD2 632 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 LDHAP00338 332 aaKnown RBP14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 SLFN14P0C7P3 912 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 FGFR3P22607 806 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 ADSSP30520 456 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 SYKP43405 635 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 GUCY2FP51841 1108 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 ARPP19P56211 112 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 CUL4BQ13620 913 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 LIN9Q5TKA1 542 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 DSTYKQ6XUX3 929 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 UNC13DQ70J99 1090 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 TMEM130Q8N3G9 435 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 GLIS3Q8NEA6 775 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 CLSTN3Q9BQT9 956 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 PLEKHA4Q9H4M7 779 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 POMKQ9H5K3 350 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 ASB7Q9H672 318 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 NR2E1Q9Y466 385 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 CDY1Q9Y6F8 540 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 STYXL1Q9Y6J8 313 aa14.08□□□□□ -0.16
CTDSPL2-209ENST00000560620 RFPL2O75678 378 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 NFICP08651 508 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 CYP3A5P20815 502 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 GARTP22102 1010 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 CD300LGQ6UXG3 332 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 RNF135Q8IUD6 432 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 NELFCDQ8IXH7 590 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 KREMEN2Q8NCW0 462 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.165e-7■■■■■ 30.4
CTDSPL2-209ENST00000560620 PAGE5Q96GU1 130 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 TSPAN18Q96SJ8 248 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 CBWD1Q9BRT8 395 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 SLC39A2Q9NP94 309 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 EXOC1Q9NV70 894 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 RBAKQ9NYW8 714 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms