RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ANGPT1Q15389 498 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 VARS2Q5ST30 1063 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 LARP1BQ659C4 914 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 SLC8B1Q6J4K2 584 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 KCNK18Q7Z418 384 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 TMEM161BQ8NDZ6 487 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 APPL2Q8NEU8 664 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 NKD2Q969F2 451 aaPredicted RBP14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 BICD1Q96G01 975 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 TBC1D17Q9HA65 648 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 ARHGEF3Q9NR81 526 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 GDE1Q9NZC3 331 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 CNTN3Q9P232 1028 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 ANKFY1Q9P2R3 1169 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 MAFFQ9ULX9 164 aa14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 MRPS23Q9Y3D9 190 aaKnown RBP14.87□□□□□ -0.03
SNRPA1-204ENST00000558020 I3L4J1 428 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 ABLIM3O94929 683 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 CLTAP09496 248 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 MAPTP10636 758 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 BRCC3P46736 316 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 SLC12A3P55017 1021 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 NTHL1P78549 312 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 SOX4Q06945 474 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 TPGS2Q68CL5 300 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 PARM1Q6UWI2 310 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 CD300LGQ6UXG3 332 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 TAS1R3Q7RTX0 852 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 RASSF8Q8NHQ8 419 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 ZMAT2Q96NC0 199 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 PNMA5Q96PV4 448 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 TSPAN18Q96SJ8 248 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 PLIN2Q99541 437 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 OXCT2Q9BYC2 517 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 SEMA4AQ9H3S1 761 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 ODF2LQ9ULJ1 636 aa14.86□□□□□ -0.03
SNRPA1-204ENST00000558020 ARHGEF37A1IGU5 675 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 ZNF197O14709 1029 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 XPOTO43592 962 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 ATF2P15336 505 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 MCM4P33991 863 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 ARPP19P56211 112 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 GPC5P78333 572 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 MCL1Q07820 350 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 SLC10A6Q3KNW5 377 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 CTXN3Q4LDR2 81 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 RSPO2Q6UXX9 243 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 HAUS6Q7Z4H7 955 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 TCEAL8Q8IYN2 117 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 ELMOD1Q8N336 334 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 C3orf58Q8NDZ4 430 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 ITFG1Q8TB96 612 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 FGF14Q92915 247 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 ZBTB45Q96K62 511 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 SUSD3Q96L08 255 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 AVENQ9NQS1 362 aaPredicted RBP14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 DNMT3BQ9UBC3 853 aaKnown RBP14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 TRIP11Q15643 1979 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 DOCK8Q8NF50 2099 aa14.85□□□□□ -0.03
SNRPA1-204ENST00000558020 ABLIM1O14639 778 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 KRT18P05783 430 aaKnown RBP14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 IGFBP6P24592 240 aaPredicted RBP14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 LIG4P49917 911 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 STARD6P59095 220 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 ROR1Q01973 937 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 PRKCQQ04759 706 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 CYP4A22Q5TCH4 519 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 IQCEQ6IPM2 695 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 ZNF280DQ6N043 979 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 FRMD5Q7Z6J6 570 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 MYCT1Q8N699 235 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 C18orf25Q96B23 403 aaPredicted RBP14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 TBC1D32Q96NH3 1257 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 CYP4F11Q9HBI6 524 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 HCFC1R1Q9NWW0 138 aa14.84□□□□□ -0.03
SNRPA1-204ENST00000558020 PRR23AA6NEV1 266 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 HNRNPDLO14979 420 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 MICAL2O94851 1124 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 FAM13AO94988 1023 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 RHOP08100 348 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 PAX3P23760 479 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 LONP1P36776 959 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 NCKAP1LP55160 1127 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 PPP2R3AQ06190 1150 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 MRPL58Q14197 206 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 TMEM119Q4V9L6 283 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 SLC44A4Q53GD3 710 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 ARSHQ5FYA8 562 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 SPECC1Q5M775 1068 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 USP37Q86T82 979 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 GPBP1Q86WP2 473 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 NPAS3Q8IXF0 933 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 ZNF512Q96ME7 567 aaPredicted RBP14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 NELL2Q99435 816 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 RPP25Q9BUL9 199 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 PARVGQ9HBI0 331 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 FBXL5Q9UKA1 691 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 TBX20Q9UMR3 447 aa14.83□□□□□ -0.04
SNRPA1-204ENST00000558020 PCDHB8Q9UN66 801 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms