RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 KRT2P35908 639 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 GDNFP39905 211 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 HSD17B4P51659 736 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 MRPL12P52815 198 aaKnown RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 PCBP3P57721 371 aaKnown RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 NUCB2P80303 420 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 IFRD2Q12894 506 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 SQSTM1Q13501 440 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 SAFBQ15424 915 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 KCNMB1Q16558 191 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 FAM110CQ1W6H9 321 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 EARS2Q5JPH6 523 aaKnown RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 JAKMIP3Q5VZ66 844 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 DENND5AQ6IQ26 1287 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 OGFOD2Q6N063 350 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 SLC30A10Q6XR72 485 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 NOP9Q86U38 636 aaKnown RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 FERMT3Q86UX7 667 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 ZSWIM9Q86XI8 627 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 DNAJC5GQ8N7S2 189 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 SHCBP1Q8NEM2 672 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 CHST13Q8NET6 341 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 COPS5Q92905 334 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 CUL5Q93034 780 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 C1orf159Q96HA4 380 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 ALPK1Q96QP1 1244 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 ADAMTS10Q9H324 1103 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 FOXP1Q9H334 677 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 ACAD9Q9H845 621 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 C6orf50Q9HD87 102 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 A1CFQ9NQ94 594 aaKnown RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 C19orf73Q9NVV2 129 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 TMEM260Q9NX78 707 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 RNF186Q9NXI6 227 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 PCDHA6Q9UN73 950 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 PCDHA8Q9Y5H6 950 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 ZSWIM8A7E2V4 1837 aa7.15□□□□□ -1.27
SCFD1-212ENST00000554486 KRTAP9-6A0A140TA67 174 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 GCOM1H8Y6P7 765 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-212ENST00000554486 NOP56O00567 594 aaKnown RBP7.14□□□□□ -1.27
SCFD1-212ENST00000554486 EDIL3O43854 480 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 MCM3APO60318 1980 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 TBC1D8O95759 1140 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 CD3EP07766 207 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 POLR2MP0CAP2 368 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 RPS6P62753 249 aaKnown RBP7.14□□□□□ -1.27
SCFD1-212ENST00000554486 CCNA1P78396 465 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 AMPD2Q01433 879 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 POU4F1Q01851 419 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 BAATQ14032 418 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-212ENST00000554486 FAM173BQ6P4H8 233 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 POMZP3Q6PJE2 187 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 NSMFQ6X4W1 530 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 NOSTRINQ8IVI9 506 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 TEX2Q8IWB9 1127 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 SAMD3Q8N6K7 520 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 POU5F2Q8N7G0 328 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 KREMEN2Q8NCW0 462 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 BICD2Q8TD16 824 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 LINC01599Q8WXQ3 324 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 CHAMP1Q96JM3 812 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 PGBD1Q96JS3 809 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 GLT8D2Q9H1C3 349 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 ZSCAN16Q9H4T2 348 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-212ENST00000554486 MROH8Q9H579 483 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 SP110Q9HB58 689 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 CYP26B1Q9NR63 512 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 CYP39A1Q9NYL5 469 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 COL20A1Q9P218 1284 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 FBXO40Q9UH90 709 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 PLXNA1Q9UIW2 1896 aa7.14□□□□□ -1.27
SCFD1-212ENST00000554486 ASTN1O14525 1302 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 FRMPD4Q14CM0 1322 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 FGF10O15520 208 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-212ENST00000554486 DLX3O60479 287 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 FOSP01100 380 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-212ENST00000554486 SCG5P05408 212 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 ZGLP1P0C6A0 271 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 RAC2P15153 192 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 CTGFP29279 349 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 TOB1P50616 345 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-212ENST00000554486 GFRA1P56159 465 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 CAP1Q01518 475 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 CNTN2Q02246 1040 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 C2orf27AQ580R0 203 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 CWF19L1Q69YN2 538 aaKnown RBP7.13□□□□□ -1.27
SCFD1-212ENST00000554486 RNF207Q6ZRF8 634 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 PIK3AP1Q6ZUJ8 805 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 BRAPQ7Z569 592 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 CRYGNQ8WXF5 182 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 EXOC2Q96KP1 924 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 TAAR1Q96RJ0 339 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 MMP19Q99542 508 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 ANO3Q9BYT9 981 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 MAF1Q9H063 256 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 GPRC5CQ9NQ84 441 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 ERVK13-1Q9NX77 482 aa7.13□□□□□ -1.27
SCFD1-212ENST00000554486 MAP3K20Q9NYL2 800 aaKnown RBP7.13□□□□□ -1.27
SCFD1-212ENST00000554486 MRPL42Q9Y6G3 142 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms