RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 APOBEC3GQ9HC16 384 aaKnown RBP13.06□□□□□ -0.32
CACNB3-213ENST00000550064 C1orf112Q9NSG2 853 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
CACNB3-213ENST00000550064 PARP2Q9UGN5 583 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 PPP2R2CQ9Y2T4 447 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 DERAQ9Y315 318 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 C2CD2Q9Y426 696 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 PCDHB2Q9Y5E7 798 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 ADGRG1Q9Y653 693 aa13.06□□□□□ -0.32
CACNB3-213ENST00000550064 MGEA5O60502 916 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 NDUFA10O95299 355 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 ASS1P00966 412 aaKnown RBP13.05□□□□□ -0.32
CACNB3-213ENST00000550064 ZSCAN20P17040 1043 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-213ENST00000550064 CYLC1P35663 651 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-213ENST00000550064 PRKCIP41743 596 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 ATN1P54259 1190 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-213ENST00000550064 MYL6P60660 151 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 GCNT1Q02742 428 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 KLHL30Q0D2K2 578 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 BFSP2Q13515 415 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 SGSM1Q2NKQ1 1148 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 TDRD12Q587J7 1177 aaKnown RBP13.05□□□□□ -0.32
CACNB3-213ENST00000550064 C1orf127Q8N9H9 656 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 ACRBPQ8NEB7 543 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 KIF12Q96FN5 646 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 FAM81BQ96LP2 452 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 CCDC42Q96M95 316 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 ZMAT2Q96NC0 199 aaKnown RBP13.05□□□□□ -0.32
CACNB3-213ENST00000550064 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 RRAGDQ9NQL2 400 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-213ENST00000550064 FAM105AQ9NUU6 356 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 DPP3Q9NY33 737 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 SIX4Q9UIU6 781 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 NUB1Q9Y5A7 615 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 PDCD11Q14690 1871 aaKnown RBP13.05□□□□□ -0.32
CACNB3-213ENST00000550064 UMODL1Q5DID0 1318 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 CENPFP49454 3210 aa13.05□□□□□ -0.32
CACNB3-213ENST00000550064 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 EIF3CLB5ME19 914 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 TLR3O15455 904 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 EVI5O60447 810 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 PQBP1O60828 265 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 ITGB3P05106 788 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 KRT19P08727 400 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 CCDC175P0C221 793 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 COL6A1P12109 1028 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 SELPP16109 830 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 GJA8P48165 433 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 GUCY2FP51841 1108 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 KIF11P52732 1056 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 NOP14P78316 857 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 ASTE1Q2TB18 679 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 LRRC8DQ7L1W4 858 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 ENOSF1Q7L5Y1 443 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 MRPL10Q7Z7H8 261 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 CXorf38Q8TB03 319 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 DIS3LQ8TF46 1054 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 SHC3Q92529 594 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 PPP1R13BQ96KQ4 1090 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 EIF3CQ99613 913 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 IMPG2Q9BZV3 1241 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 XYLT2Q9H1B5 865 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 RNF19AQ9NV58 838 aa13.04□□□□□ -0.32
CACNB3-213ENST00000550064 REXO2Q9Y3B8 237 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 BZW2Q9Y6E2 419 aaKnown RBP13.04□□□□□ -0.32
CACNB3-213ENST00000550064 SMIM28A0A1B0GU29 152 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 CCP110O43303 1012 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 AKR1B10O60218 316 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 CLSTN1O94985 981 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 CCDC172P0C7W6 258 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 ITGA4P13612 1032 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 KCNE1P15382 129 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 USP8P40818 1118 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 PTK2Q05397 1052 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 CUL2Q13617 745 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 ZNF699Q32M78 642 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 GLRA4Q5JXX5 417 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 ANKRD33Q7Z3H0 272 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 ZNF571Q7Z3V5 609 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-213ENST00000550064 FMNL3Q8IVF7 1028 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 FAM71AQ8IYT1 594 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 TAF4BQ92750 862 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 C18orf25Q96B23 403 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-213ENST00000550064 TSPAN18Q96SJ8 248 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 ARID3AQ99856 593 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 ADAM2Q99965 735 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 TRAIPQ9BWF2 469 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 ITGA11Q9UKX5 1188 aa13.03□□□□□ -0.32
CACNB3-213ENST00000550064 AGAP1Q9UPQ3 857 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms