RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 COL6A1P12109 1028 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 AKAP5P24588 427 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 PRKCIP41743 596 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 GUCY2FP51841 1108 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 MYL6P60660 151 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 GCNT1Q02742 428 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 ARID5AQ03989 594 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 NFX1Q12986 1120 aaKnown RBP14.29□□□□□ -0.12
CHFR-221ENST00000542714 PAK2Q13177 524 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 TMEM132DQ14C87 1099 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 ZBTB6Q15916 424 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 XKR4Q5GH76 650 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 TWF2Q6IBS0 349 aaKnown RBP14.29□□□□□ -0.12
CHFR-221ENST00000542714 SLC39A5Q6ZMH5 540 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 CD302Q8IX05 232 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 REXO1L1PQ8IX06 675 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 PPM1KQ8N3J5 372 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 DIS3LQ8TF46 1054 aaKnown RBP14.29□□□□□ -0.12
CHFR-221ENST00000542714 SHC3Q92529 594 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 PPP1R13BQ96KQ4 1090 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 ARID3AQ99856 593 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 APOL6Q9BWW8 343 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 TRIM6Q9C030 488 aaPredicted RBP14.29□□□□□ -0.12
CHFR-221ENST00000542714 XYLT2Q9H1B5 865 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 CNTN3Q9P232 1028 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 NUB1Q9Y5A7 615 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 PCDHB2Q9Y5E7 798 aa14.29□□□□□ -0.12
CHFR-221ENST00000542714 A0A0U1RQJ8 604 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 SSU72P8A0A1W2PR75 194 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 TDRD15B5MCY1 1934 aaKnown RBP14.28□□□□□ -0.12
CHFR-221ENST00000542714 ZNF263O14978 683 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 EVI5O60447 810 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 FERP16591 822 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 NOP14P78316 857 aaKnown RBP14.28□□□□□ -0.12
CHFR-221ENST00000542714 GPNMBQ14956 572 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 WDR44Q5JSH3 913 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 NT5DC4Q86YG4 428 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 CCDC170Q8IYT3 715 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 UBR7Q8N806 425 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 ATRIPQ8WXE1 791 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 KIF12Q96FN5 646 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 SYT11Q9BT88 431 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 HAUS4Q9H6D7 363 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 C1orf112Q9NSG2 853 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 FAM105AQ9NUU6 356 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 TRMT1Q9NXH9 659 aaKnown RBP14.28□□□□□ -0.12
CHFR-221ENST00000542714 KLK14Q9P0G3 267 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 DERAQ9Y315 318 aa14.28□□□□□ -0.12
CHFR-221ENST00000542714 MEIS3P2A8K0S8 358 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 EIF3CLB5ME19 914 aaKnown RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 LCA5LO95447 670 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 SELPP16109 830 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 ACO1P21399 889 aaKnown RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 CYLC1P35663 651 aaPredicted RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 GJA8P48165 433 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 KIF11P52732 1056 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 ATN1P54259 1190 aaPredicted RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 MFAP3P55082 362 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 PTK2Q05397 1052 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 KLHL30Q0D2K2 578 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 CUL2Q13617 745 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 TDRD12Q587J7 1177 aaKnown RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 LRRC8DQ7L1W4 858 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 ANKRD33Q7Z3H0 272 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 ZNF571Q7Z3V5 609 aaPredicted RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 MRPL10Q7Z7H8 261 aaKnown RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 FAM71AQ8IYT1 594 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 USP38Q8NB14 1042 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 LINC01599Q8WXQ3 324 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 C18orf25Q96B23 403 aaPredicted RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 EIF3CQ99613 913 aaKnown RBP14.27□□□□□ -0.13
CHFR-221ENST00000542714 TRAIPQ9BWF2 469 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 RNF19AQ9NV58 838 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 TUBGCP4Q9UGJ1 667 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 PARP2Q9UGN5 583 aa14.27□□□□□ -0.13
CHFR-221ENST00000542714 TET1Q8NFU7 2136 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 PQBP1O60828 265 aaKnown RBP14.26□□□□□ -0.13
CHFR-221ENST00000542714 ITGB3P05106 788 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 CCDC175P0C221 793 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 KCNE1P15382 129 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 ATF7P17544 494 aaPredicted RBP14.26□□□□□ -0.13
CHFR-221ENST00000542714 POLR2BP30876 1174 aaKnown RBP14.26□□□□□ -0.13
CHFR-221ENST00000542714 TRPC3Q13507 836 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 BFSP2Q13515 415 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 SGSM1Q2NKQ1 1148 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 TRIM60Q495X7 471 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 ENOSF1Q7L5Y1 443 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 LPPQ93052 612 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 CCDC42Q96M95 316 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 DPP3Q9NY33 737 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 ITGA11Q9UKX5 1188 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 NENFQ9UMX5 172 aa14.26□□□□□ -0.13
CHFR-221ENST00000542714 SMIM28A0A1B0GU29 152 aa14.25□□□□□ -0.13
CHFR-221ENST00000542714 PTGESO14684 152 aa14.25□□□□□ -0.13
CHFR-221ENST00000542714 PPEF2O14830 753 aa14.25□□□□□ -0.13
CHFR-221ENST00000542714 TLR3O15455 904 aaKnown RBP14.25□□□□□ -0.13
CHFR-221ENST00000542714 NBNO60934 754 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms