RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 TCHPQ9BT92 498 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 EIF2AQ9BY44 585 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 OSBPL7Q9BZF2 842 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 RPF1Q9H9Y2 349 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 TOPORSQ9NS56 1045 aaPredicted RBP11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 GINS2Q9Y248 185 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 MGEA5O60502 916 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 AFPP02771 609 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 CYP3A5P20815 502 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 MTIF2P46199 727 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 FILIP1LQ4L180 1135 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 SLC24A5Q71RS6 500 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 PLEKHO2Q8TD55 490 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 PCDHB2Q9Y5E7 798 aa11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.11□□□□□ -0.63
CAPRIN1-215ENST00000533657 TDRD15B5MCY1 1934 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 ABHD14A-ACY1A0A1B0GW23 586 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 LRRIQ3A6PVS8 624 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 MEFVO15553 781 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 MATR3P43243 847 aaKnown RBP eCLIP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 TWF2Q6IBS0 349 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 ZBTB33Q86T24 672 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 ZSWIM2Q8NEG5 633 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 NDST4Q9H3R1 872 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 TMEM8AQ9HCN3 771 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 IL23AQ9NPF7 189 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 STAU1O95793 577 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 ATF7P17544 494 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 PAX3P23760 479 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 CYP2C18P33260 490 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 ZNF75DP51815 510 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 YARSP54577 528 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 IRX1P78414 480 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 ZBTB6Q15916 424 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 SLC10A6Q3KNW5 377 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 RTN4RL1Q86UN2 441 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 UBXN4Q92575 508 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 FAM107BQ9H098 131 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 TMEM161AQ9NX61 479 aa11.1□□□□□ -0.63
CAPRIN1-215ENST00000533657 A0A087WUV0 522 aaPredicted RBP11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 TNFSF9P41273 254 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 FIGNQ5HY92 759 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 ADAM2Q99965 735 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 TRIM6Q9C030 488 aaPredicted RBP11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 FAM124BQ9H5Z6 455 aaPredicted RBP11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 INTS13Q9NVM9 706 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 GOLGA8IPA6NC78 632 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 GOLGA8JA6NMD2 632 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 HOXA2O43364 376 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 ZC3H11AO75152 810 aaKnown RBP eCLIP11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 RAG1P15918 1043 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 FMO5P49326 533 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 ACOT2P49753 483 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 UBASH3AP57075 661 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 TADA2BQ86TJ2 420 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 NPAS4Q8IUM7 802 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 DBF4BQ8NFT6 615 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 FAM210AQ96ND0 272 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 PPP1R12CQ9BZL4 782 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 TRIM5Q9C035 493 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 NXF3Q9H4D5 531 aaKnown RBP11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 TAB2Q9NYJ8 693 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 FBXL5Q9UKA1 691 aa11.09□□□□□ -0.63
CAPRIN1-215ENST00000533657 ENPP3O14638 875 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 SERPINC1P01008 464 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 C4BPAP04003 597 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 ITGA4P13612 1032 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 RFX1P22670 979 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 NFX1Q12986 1120 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 ZACNQ401N2 412 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 EPC2Q52LR7 807 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 FKBP15Q5T1M5 1219 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 THNSL1Q8IYQ7 743 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 CACTINQ8WUQ7 758 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 PLCB1Q9NQ66 1216 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 SNTG2Q9NY99 539 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 TTC3P53804 2025 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 XPOTO43592 962 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 RECQL4O94761 1208 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 CXCL8P10145 99 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 ITGB8P26012 769 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 TCTN1Q2MV58 587 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 KRT39Q6A163 491 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 FMNL3Q8IVF7 1028 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 MICALL1Q8N3F8 863 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 TAF4BQ92750 862 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 FAM81BQ96LP2 452 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 FNBP1Q96RU3 617 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 EDEM3Q9BZQ6 932 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 XPO4Q9C0E2 1151 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 VRTNQ9H8Y1 702 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 L2HGDHQ9H9P8 463 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 IFNKQ9P0W0 207 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 PRKAG2Q9UGJ0 569 aa11.08□□□□□ -0.64
CAPRIN1-215ENST00000533657 TRIP11Q15643 1979 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms