RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 RASA4BC9J798 803 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SMAPO00193 183 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 RASA4O43374 803 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 E2F6O75461 281 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 VCAM1P19320 739 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 MAP4P27816 1152 aaKnown RBP8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SULT1E1P49888 294 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 PMS2P54278 862 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SYTL3Q4VX76 610 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SAMD3Q8N6K7 520 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 RAPGEF5Q92565 580 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 TTC17Q96AE7 1141 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 TAAR1Q96RJ0 339 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SPON2Q9BUD6 331 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 NRBP1Q9UHY1 535 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 PLAAQ9Y263 795 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 UPP2O95045 317 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 KRT14P02533 472 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 EEF1DP29692 281 aaKnown RBP8.92□□□□□ -0.98
CTNND1-225ENST00000530094 GCLCP48506 637 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-225ENST00000530094 UGP2Q16851 508 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 RNF149Q8NC42 400 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 CAMKK2Q96RR4 588 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 MAP3K14Q99558 947 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 FAM129AQ9BZQ8 928 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 XAB2Q9HCS7 855 aaKnown RBP8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SENP1Q9P0U3 644 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 CFAP69A5D8W1 941 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 FTLP02792 175 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-225ENST00000530094 ITGA4P13612 1032 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 PNPLA4P41247 253 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 P3H1Q32P28 736 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 DCAF4L1Q3SXM0 396 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SZRD1Q7Z422 152 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 LRRC43Q8N309 656 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SCFD2Q8WU76 684 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 PARD6BQ9BYG5 372 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 SELENONQ9NZV5 590 aa8.92□□□□□ -0.98
CTNND1-225ENST00000530094 FAM205CA6NFA0 338 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 PCSK1P29120 753 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 ADCY1Q08828 1119 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 TBC1D1Q86TI0 1168 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 HOMEZQ8IX15 550 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 ST13P4Q8IZP2 240 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 RMDN1Q96DB5 314 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 AGPAT1Q99943 283 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 UVRAGQ9P2Y5 699 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 MANSC4A6NHS7 340 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 HIST1H2AGP0C0S8 130 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 RALBP11234 206 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 HIST1H2ADP20671 130 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 PTPN21Q16825 1174 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 DDX53Q86TM3 631 aaKnown RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.91□□□□□ -0.983e-6■■■■■ 50.8
CTNND1-225ENST00000530094 HIST1H2AHQ96KK5 128 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 HIST1H2AJQ99878 128 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 H2AFJQ9BTM1 129 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 KIF17Q9P2E2 1029 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 SLC4A7Q9Y6M7 1214 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 EMSYQ7Z589 1322 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 WDR91A4D1P6 747 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 GOLGA8TH3BQL2 631 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 DFFAO00273 331 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 MOCS2O96007 188 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 STAG3L1P0CL83 205 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 GCKP35557 465 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 TMCO4Q5TGY1 634 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 ELOA2Q8IYF1 753 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 UPF1Q92900 1129 aaKnown RBP eCLIP8.91□□□□□ -0.986e-7■■□□□ 14.4
CTNND1-225ENST00000530094 GRAMD1AQ96CP6 724 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 IL25Q9H293 177 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 DDX4Q9NQI0 724 aaKnown RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 PPARGC1AQ9UBK2 798 aaKnown RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 ADGRB2O60241 1585 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 C3orf70A6NLC5 250 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 PRPF4O43172 522 aaKnown RBP eCLIP8.91□□□□□ -0.984e-8■□□□□ 10.4
CTNND1-225ENST00000530094 VIL1P09327 827 aaKnown RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 ARL4DP49703 201 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 APOBEC3HQ6NTF7 200 aaKnown RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 GLB1LQ6UWU2 654 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 RNF180Q86T96 592 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 MFN1Q8IWA4 741 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 CATSPERBQ9H7T0 1116 aa8.91□□□□□ -0.98
CTNND1-225ENST00000530094 PRMT7Q9NVM4 692 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-225ENST00000530094 ARHGAP10A1A4S6 786 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 CCDC22O60826 627 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 RPS6KA5O75582 802 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 LCP1P13796 627 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 LAMC2Q13753 1193 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 CASP8Q14790 479 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 MAPRE1Q15691 268 aaKnown RBP8.9□□□□□ -0.98
CTNND1-225ENST00000530094 DGKDQ16760 1214 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 THEMIS2Q5TEJ8 643 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 STX19Q8N4C7 294 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 GLT1D1Q96MS3 346 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 HEMGNQ9BXL5 484 aa8.9□□□□□ -0.98
CTNND1-225ENST00000530094 SARS2Q9NP81 518 aaKnown RBP8.9□□□□□ -0.98
CTNND1-225ENST00000530094 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-225ENST00000530094 SNX5Q9Y5X3 404 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms