RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 SLC7A5Q01650 507 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 PRKCZQ05513 592 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 MFSD10Q14728 455 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 FSCN1Q16658 493 aaKnown RBP8.28□□□□□ -1.08
SOX6-211ENST00000528429 WDR44Q5JSH3 913 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 MARCH8Q5T0T0 291 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 NFRKBQ6P4R8 1299 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 MPZL3Q6UWV2 235 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 KIAA0319LQ8IZA0 1049 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 SLC20A1Q8WUM9 679 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 KAT2BQ92831 832 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 KREMEN1Q96MU8 473 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 SLX1AQ9BQ83 275 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 FZD8Q9H461 694 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 PRMT7Q9NVM4 692 aaPredicted RBP8.28□□□□□ -1.08
SOX6-211ENST00000528429 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 NAGPAQ9UK23 515 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 FBXO9Q9UK97 447 aaPredicted RBP8.28□□□□□ -1.08
SOX6-211ENST00000528429 DDX3XO00571 662 aaKnown RBP eCLIP8.28□□□□□ -1.08
SOX6-211ENST00000528429 CYP26A1O43174 497 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 ZEB2O60315 1214 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 TACC1O75410 805 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 PGK1P00558 417 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 AKR1A1P14550 325 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 GTF2H1P32780 548 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 DNA2P51530 1060 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 GPC3P51654 580 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 MCL1Q07820 350 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 DEFB115Q30KQ5 88 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 ZACNQ401N2 412 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 GNASQ5JWF2 1037 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 BRSK2Q8IWQ3 736 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 TRIB2Q92519 343 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 PSMB7Q99436 277 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 MTMR12Q9C0I1 747 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 CDT1Q9H211 546 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 KIAA1522Q9P206 1035 aaPredicted RBP8.28□□□□□ -1.08
SOX6-211ENST00000528429 RABL2AQ9UBK7 228 aaPredicted RBP8.28□□□□□ -1.08
SOX6-211ENST00000528429 COQ4Q9Y3A0 265 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 COL1A2P08123 1366 aa8.28□□□□□ -1.08
SOX6-211ENST00000528429 MYADML2A6NDP7 307 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 TRPA1O75762 1119 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 ALDH1A1P00352 501 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 CALCAP01258 141 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 ATP1A1P05023 1023 aaKnown RBP8.27□□□□□ -1.08
SOX6-211ENST00000528429 CXCL8P10145 99 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 CYP2C9P11712 490 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 ABCB4P21439 1286 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 TNFAIP3P21580 790 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 PSEN2P49810 448 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 ZNF200P98182 395 aaPredicted RBP8.27□□□□□ -1.08
SOX6-211ENST00000528429 TRIM32Q13049 653 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 MFSD14CQ5VZR4 134 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 IQCF2Q8IXL9 164 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 TMEM192Q8IY95 271 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 TXLNBQ8N3L3 684 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 TRPV1Q8NER1 839 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 HELQQ8TDG4 1101 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 KCNN1Q92952 543 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 CGRRF1Q99675 332 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 RASSF4Q9H2L5 321 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 RETREG1Q9H6L5 497 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 MRFAP1Q9Y605 127 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 CNTNAP2Q9UHC6 1331 aa8.27□□□□□ -1.08
SOX6-211ENST00000528429 RRN3P2A6NIE6 340 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 GPR25O00155 361 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 ABLIM1O14639 778 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 PMM2O15305 246 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 SRGAP2O75044 1071 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 SGPL1O95470 568 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 C4BPAP04003 597 aaKnown RBP8.27□□□□□ -1.09
SOX6-211ENST00000528429 ELNP15502 786 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 ARF4P18085 180 aaPredicted RBP8.27□□□□□ -1.09
SOX6-211ENST00000528429 NCOA4Q13772 614 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 PTPROQ16827 1216 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 SCARA3Q6AZY7 606 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 RUFY4Q6ZNE9 571 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 SLC47A2Q86VL8 602 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 PALB2Q86YC2 1186 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 LINC01465Q8N7H1 131 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 TRIM58Q8NG06 486 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 LNX1Q8TBB1 728 aaPredicted RBP8.27□□□□□ -1.09
SOX6-211ENST00000528429 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 NOX5Q96PH1 765 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 ALS2CR12Q96Q35 445 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 OSMRQ99650 979 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 IMPG2Q9BZV3 1241 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 TNFSF13BQ9Y275 285 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 NRCAMQ92823 1304 aa8.27□□□□□ -1.09
SOX6-211ENST00000528429 TREHO43280 583 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CTIFO43310 598 aaKnown RBP8.26□□□□□ -1.09
SOX6-211ENST00000528429 FAM189A1O60320 539 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 VNN1O95497 513 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 TMEM191BP0C7N4 346 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 CAP1Q01518 475 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 HIC1Q14526 733 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 KIF22Q14807 665 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 NAB2Q15742 525 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 C15orf39Q6ZRI6 1047 aa8.26□□□□□ -1.09
SOX6-211ENST00000528429 FMNL3Q8IVF7 1028 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms