RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PI4K2BG5E9Z4 385 aa28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 RPL17P18621 184 aaKnown RBP28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 ZBTB6Q15916 424 aa28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 KANK3Q6NY19 840 aa28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 PALB2Q86YC2 1186 aa28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 LEO1Q8WVC0 666 aaPredicted RBP28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 KIF12Q96FN5 646 aa28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 RPGRIP1Q96KN7 1286 aa28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 SPATA32Q96LK8 384 aa28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 AGO2Q9UKV8 859 aaKnown RBP28.69■■■□□ 2.18
TSPAN4-217ENST00000527644 TISP43B9A030 160 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 MYBP10242 640 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 CYP3A5P20815 502 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 BRCC3P46736 316 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 CASP5P51878 434 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 KCNA1Q09470 495 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 LILRA6Q6PI73 481 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 TMC5Q6UXY8 1006 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 GLYCTKQ8IVS8 523 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 C7orf25Q9BPX7 421 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 CLSTN3Q9BQT9 956 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 PLEKHA4Q9H4M7 779 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 EPHX3Q9H6B9 360 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 CDH22Q9UJ99 828 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 KCNH3Q9ULD8 1083 aa28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 UBQLN1Q9UMX0 589 aaKnown RBP28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 PDCD11Q14690 1871 aaKnown RBP28.68■■■□□ 2.18
TSPAN4-217ENST00000527644 TGM5O43548 720 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 XPOTO43592 962 aaKnown RBP28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 ALADP13716 330 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 POU5F1Q01860 360 aaKnown RBP28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 SPAG1Q07617 926 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 GPR149Q86SP6 731 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 CMASQ8NFW8 434 aaPredicted RBP28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 POMGNT1Q8WZA1 660 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 C1QTNF1Q9BXJ1 281 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 IKZF4Q9H2S9 585 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 TUBGCP4Q9UGJ1 667 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 NUB1Q9Y5A7 615 aa28.67■■■□□ 2.18
TSPAN4-217ENST00000527644 WEE2P0C1S8 567 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 ADSSP30520 456 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 LRPAP1P30533 357 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 ACOT2P49753 483 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 ASIC1P78348 528 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 C15orf39Q6ZRI6 1047 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 STXBP4Q6ZWJ1 553 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 RNF135Q8IUD6 432 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 SYCP3Q8IZU3 236 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 FGFBP2Q9BYJ0 223 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 POMKQ9H5K3 350 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 TMEM206Q9H813 350 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 PLXNA3P51805 1871 aa28.66■■■□□ 2.18
TSPAN4-217ENST00000527644 VWA8A3KMH1 1905 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 I3L4J1 428 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 SPATA31D3P0C874 917 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 CMA1P23946 247 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 TKTP29401 623 aaKnown RBP28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 CYP26C1Q6V0L0 522 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 SPATA31D4Q6ZUB0 917 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 ANKS3Q6ZW76 656 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 FAM212AQ96EL1 285 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 SCAND2PQ9GZW5 306 aaPredicted RBP28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 ASB7Q9H672 318 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 MTRRQ9UBK8 725 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 NR2E1Q9Y466 385 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 BACE2Q9Y5Z0 518 aa28.65■■■□□ 2.18
TSPAN4-217ENST00000527644 SYN3O14994 580 aa28.64■■■□□ 2.18
TSPAN4-217ENST00000527644 DCXO43602 365 aa28.64■■■□□ 2.18
TSPAN4-217ENST00000527644 CEP57L1Q8IYX8 460 aa28.64■■■□□ 2.18
TSPAN4-217ENST00000527644 KREMEN2Q8NCW0 462 aa28.64■■■□□ 2.18
TSPAN4-217ENST00000527644 CHAMP1Q96JM3 812 aa28.64■■■□□ 2.18
TSPAN4-217ENST00000527644 RHOBTB2Q9BYZ6 727 aa28.64■■■□□ 2.18
TSPAN4-217ENST00000527644 DERAQ9Y315 318 aa28.64■■■□□ 2.18
TSPAN4-217ENST00000527644 CCDC195A0A1B0GUA6 201 aa28.63■■■□□ 2.17
TSPAN4-217ENST00000527644 PRPF6O94906 941 aaKnown RBP28.63■■■□□ 2.17
TSPAN4-217ENST00000527644 GARTP22102 1010 aa28.63■■■□□ 2.17
TSPAN4-217ENST00000527644 SPATA1Q5VX52 437 aa28.63■■■□□ 2.17
TSPAN4-217ENST00000527644 JADE1Q6IE81 842 aa28.63■■■□□ 2.17
TSPAN4-217ENST00000527644 UNC13DQ70J99 1090 aa28.63■■■□□ 2.17
TSPAN4-217ENST00000527644 SUSD3Q96L08 255 aa28.63■■■□□ 2.17
TSPAN4-217ENST00000527644 PAPLNO95428 1278 aa28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 SLFN14P0C7P3 912 aa28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 MCM4P33991 863 aa28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 RAB33AQ14088 237 aa28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 CRELD2Q6UXH1 353 aaPredicted RBP28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 BEST2Q8NFU1 509 aa28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 HPS3Q969F9 1004 aa28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 ZDHHC7Q9NXF8 308 aa28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 FBXW11Q9UKB1 542 aa28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 MTCL1Q9Y4B5 1905 aaKnown RBP28.62■■■□□ 2.17
TSPAN4-217ENST00000527644 ADAM12O43184 909 aa28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 LDHAP00338 332 aaKnown RBP28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 OR1D2P34982 312 aa28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 AFMP43652 599 aa28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 TMEM132DQ14C87 1099 aa28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 VARS2Q5ST30 1063 aaKnown RBP28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 FEZF2Q8TBJ5 459 aa28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 TSHZ2Q9NRE2 1034 aa28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 USP25Q9UHP3 1055 aa28.61■■■□□ 2.17
TSPAN4-217ENST00000527644 SERTAD1Q9UHV2 236 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms