RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 FAF2Q96CS3 445 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 DNAJC19Q96DA6 116 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 POLLQ9UGP5 575 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 LRFN2Q9ULH4 789 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 UBE4BO95155 1302 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 PARP4Q9UKK3 1724 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 MAPK13O15264 365 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 SEPT6Q14141 434 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 GIT2Q14161 759 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 WDR72Q3MJ13 1102 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 AP1ARQ63HQ0 302 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 PHLDB3Q6NSJ2 640 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 SAMD7Q7Z3H4 446 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 SCFD2Q8WU76 684 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 TEX13BQ9BXU2 312 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 C4AP0C0L4 1744 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 C4BP0C0L5 1744 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 BNIP3LO60238 219 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 ENTPD3O75355 529 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 NOL4O94818 638 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 NQO1P15559 274 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 IFI35P80217 286 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 APOBEC3FQ8IUX4 373 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 RYBPQ8N488 228 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 SEMA4AQ9H3S1 761 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 CPSF3Q9UKF6 684 aaKnown RBP11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 TLK1Q9UKI8 766 aa11.47□□□□□ -0.57
PCDHGA1-202ENST00000517417 UBOX5O94941 541 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 SERPINB6P35237 376 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 CRYMQ14894 314 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 MMEL1Q495T6 779 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 TRMT10CQ7L0Y3 403 aaKnown RBP11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 GPD1LQ8N335 351 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 STAMBPL1Q96FJ0 436 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 SNF8Q96H20 258 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 TUFT1Q9NNX1 390 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 M0QYV0 167 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 NKRFO15226 690 aaKnown RBP eCLIP11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 DNAJC8O75937 253 aaPredicted RBP11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 ANP32DO95626 131 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 TXNP10599 105 aaKnown RBP11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 RPA1P27694 616 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 C2orf69Q8N8R5 385 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 SYT2Q8N9I0 419 aaPredicted RBP11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 RBM41Q96IZ5 413 aaKnown RBP11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 MRPL4Q9BYD3 311 aaKnown RBP11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 NEUROG2Q9H2A3 272 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 ELP3Q9H9T3 547 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 HSPBP1Q9NZL4 362 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 PHLPP1O60346 1717 aa11.46□□□□□ -0.57
PCDHGA1-202ENST00000517417 SHBGP04278 402 aa11.46□□□□□ -0.58
PCDHGA1-202ENST00000517417 ELF3P78545 371 aaPredicted RBP11.46□□□□□ -0.58
PCDHGA1-202ENST00000517417 DUOXA2Q1HG44 320 aa11.46□□□□□ -0.58
PCDHGA1-202ENST00000517417 ANGEL2Q5VTE6 544 aaKnown RBP11.46□□□□□ -0.58
PCDHGA1-202ENST00000517417 FAM151AQ8WW52 585 aa11.46□□□□□ -0.58
PCDHGA1-202ENST00000517417 RUSC1Q9BVN2 902 aa11.46□□□□□ -0.58
PCDHGA1-202ENST00000517417 ADAM33Q9BZ11 813 aa11.46□□□□□ -0.58
PCDHGA1-202ENST00000517417 PIK3R2O00459 728 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 ASAP2O43150 1006 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 HUS1O60921 280 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 SPAG7O75391 227 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 DRD4P21917 467 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 CCND1P24385 295 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 COPS2P61201 443 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 PSMC6P62333 389 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 ACER1Q8TDN7 264 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 TTC17Q96AE7 1141 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 FGFBP2Q9BYJ0 223 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 BATF3Q9NR55 127 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 RTN2O75298 545 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 PDHA1P08559 390 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 SPARCL1Q14515 664 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 SCN4BQ8IWT1 228 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 LRRC15Q8TF66 581 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 PRMT6Q96LA8 375 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 LRRC37BQ96QE4 947 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 RTFDC1Q9BY42 306 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 PI4K2BG5E9Z4 385 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 RFX1P22670 979 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 SDC4P31431 198 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 COILP38432 576 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 RAD23BP54727 409 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 ECM1Q16610 540 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 KYNUQ16719 465 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 SPOPLQ6IQ16 392 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 DEFB132Q7Z7B7 95 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 BBS5Q8N3I7 341 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 MORC4Q8TE76 937 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 MMP19Q99542 508 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 ZSWIM1Q9BR11 485 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 L3MBTL1Q9Y468 752 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 DCTN3O75935 186 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 CALB1P05937 261 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 SRGAP2BP0DMP2 458 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 CASP5P51878 434 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 TFDP2Q14188 446 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 ASTE1Q2TB18 679 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 ERMARDQ5T6L9 678 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 ROPN1BQ9BZX4 212 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms