RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	B4GALT4	O60513	344 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	IL18RAP	O95256	599 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SGPL1	O95470	568 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	VTN	P04004	478 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ATP1A1	P05023	1023 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	H2AFZ	P0C0S5	128 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	IQCF3	P0C7M6	154 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TMEM253	P0C7T8	217 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SMIM10L2A	P0DMW4	78 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SMIM10L2B	P0DMW5	78 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MCF2	P10911	925 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CHRNB2	P17787	502 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ACO1	P21399	889 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MATR3	P43243	847 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CPT1A	P50416	773 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	FCGRT	P55899	365 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TUBB4B	P68371	445 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NKX3-2	P78367	333 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ADAM17	P78536	824 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NAA30	Q147X3	362 aa	Predicted RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TCEAL1	Q15170	157 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	KYAT1	Q16773	422 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	KIAA0753	Q2KHM9	967 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SEZ6	Q53EL9	994 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	WDR44	Q5JSH3	913 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	EEF1DP3	Q658K8	133 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NFRKB	Q6P4R8	1299 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	H2AFV	Q71UI9	128 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	RSRC2	Q7L4I2	434 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SRGAP1	Q7Z6B7	1085 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ZBTB33	Q86T24	672 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NOP9	Q86U38	636 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TLK2	Q86UE8	772 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ZNF410	Q86VK4	478 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GLYCTK	Q8IVS8	523 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PPM1K	Q8N3J5	372 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CEP112	Q8N8E3	955 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MNS1	Q8NEH6	495 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TRPV1	Q8NER1	839 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	OR5B17	Q8NGF7	314 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	EPS8L1	Q8TE68	723 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	U2AF1L4	Q8WU68	220 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	DHX38	Q92620	1227 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ZNF668	Q96K58	619 aa	Predicted RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NOX5	Q96PH1	765 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ALS2CR12	Q96Q35	445 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MAP7D2	Q96T17	732 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TCHP	Q9BT92	498 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	INO80B	Q9C086	356 aa	Predicted RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	AP5M1	Q9H0R1	490 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ISCU	Q9H1K1	167 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CDT1	Q9H211	546 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ADAMTS10	Q9H324	1103 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PDZD7	Q9H5P4	517 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	APOBEC3G	Q9HC16	384 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SETD4	Q9NVD3	440 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NOCT	Q9UK39	431 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CNTN6	Q9UQ52	1028 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	AKT3	Q9Y243	479 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PCDHGC5	Q9Y5F6	944 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	SAR1B	Q9Y6B6	198 aa		4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MYH9	P35579	1960 aa	Known RBP	4.83	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MCM3AP	O60318	1980 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	NCAN	O14594	1321 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854		A0A1B0GUA9	196 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GRID2IP	A4D2P6	1211 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ANKRD62	A6NC57	917 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ENC1	O14682	589 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MEFV	O15553	781 aa	Predicted RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CYP26A1	O43174	497 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	BUB1	O43683	1085 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TSPAN1	O60635	241 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	KPNA6	O60684	536 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	RTN2	O75298	545 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	DUSP11	O75319	330 aa	Known RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GPR32	O75388	356 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PALM	O75781	387 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TOMM70	O94826	608 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ASS1	P00966	412 aa	Known RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CST3	P01034	146 aa	Predicted RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	MYL3	P08590	195 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CLTA	P09496	248 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	STAG3L1	P0CL83	205 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	HARS	P12081	509 aa	Known RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GZMA	P12544	262 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CYBA	P13498	195 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	AKR1A1	P14550	325 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	CYP11B1	P15538	503 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TCP1	P17987	556 aa	Known RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	ARF4	P18085	180 aa	Predicted RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	TBXAS1	P24557	533 aa	Predicted RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	HOXC8	P31273	242 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PIK3CA	P42336	1068 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	PSMC4	P43686	418 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GALC	P54803	685 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	HADHB	P55084	474 aa	Known RBP	4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	GJA9	P57773	515 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	BPIFB4	P59827	614 aa		4.82	□□□□□ -1.64
ATP2C1-223	ENST00000515854	LACTB	P83111	547 aa	Predicted RBP	4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms