RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 VSIG10LQ86VR7 867 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 KCNN1Q92952 543 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 LENG9Q96B70 501 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 RMDN3Q96TC7 470 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 PDCD2LQ9BRP1 358 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 DHRS4Q9BTZ2 278 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 GRID1Q9ULK0 1009 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 ACTL7BQ9Y614 415 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 SOWAHBA6NEL2 793 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 ANP32DO95626 131 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 ZNF16P17020 682 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 CYP2B6P20813 491 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 MRPS25P82663 173 aaKnown RBP7.94□□□□□ -1.14
CLIP1-205ENST00000514271 LAMC2Q13753 1193 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 USH1GQ495M9 461 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 C11orf63Q6NUN7 778 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 B3GNT9Q6UX72 402 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 EXOC3L1Q86VI1 746 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 OGDHLQ9ULD0 1010 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 GABRQQ9UN88 632 aa7.94□□□□□ -1.14
CLIP1-205ENST00000514271 NFIBO00712 420 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 AGTP01019 485 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 RARBP10826 455 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 FGFR1P11362 822 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 ACADSP16219 412 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 PON1P27169 355 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 CTGFP29279 349 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 GJA8P48165 433 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 CPT1AP50416 773 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 GJA9P57773 515 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 MTMR3Q13615 1198 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 PGM5Q15124 567 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 NONOQ15233 471 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 C1orf53Q5VUE5 145 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 DRAXINQ8NBI3 349 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 NPLOC4Q8TAT6 608 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 ASAP3Q8TDY4 903 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 CKAP2Q8WWK9 683 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 TRIB2Q92519 343 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 HPS3Q969F9 1004 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 SPACA7Q96KW9 195 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 HAPLN3Q96S86 360 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 ANO3Q9BYT9 981 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 UBIAD1Q9Y5Z9 338 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 MEIS2O14770 477 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 SLC37A4O43826 429 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 CFBP00751 764 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 GH1P01241 217 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 C1QAP02745 245 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 NR3C2P08235 984 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 TPBGLP0DKB5 382 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 PECAM1P16284 738 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 YARSP54577 528 aaKnown RBP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 GIT2Q14161 759 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 DUSP28Q4G0W2 176 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 CFAP58Q5T655 872 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 CWF19L1Q69YN2 538 aaKnown RBP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 TRPM8Q7Z2W7 1104 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 RNF180Q86T96 592 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 TNS4Q8IZW8 715 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 GALNT15Q8N3T1 639 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 NSMCE1Q8WV22 266 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 KRT12Q99456 494 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 NOC4LQ9BVI4 516 aaKnown RBP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 KATNAL1Q9BW62 490 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 AP5M1Q9H0R1 490 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 CARD9Q9H257 536 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 G3BP2Q9UN86 482 aaKnown RBP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 RIPK2O43353 540 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 ZNF865P0CJ78 1059 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 CCL5P13501 91 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 STAT6P42226 847 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 TNNT3P45378 269 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 Q4G0T1 1027 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 SLC30A10Q6XR72 485 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 DDX42Q86XP3 938 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLIP1-205ENST00000514271 NEK9Q8TD19 979 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 NRG4Q8WWG1 115 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 FGD4Q96M96 766 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 ARHGAP39Q9C0H5 1083 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 KATNBL1Q9H079 304 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 RXFP1Q9HBX9 757 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 TBC1D22BQ9NU19 505 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 WDR35Q9P2L0 1181 aa7.93□□□□□ -1.14
CLIP1-205ENST00000514271 FAM187AA6NFU0 413 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 OR52Z1P0C646 297 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 HOXD8P13378 290 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 CHN1P15882 459 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 SLC26A2P50443 739 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 MNAT1P51948 309 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 GRM2Q14416 872 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 FRMD5Q7Z6J6 570 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 NOP9Q86U38 636 aaKnown RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 LRRC34Q8IZ02 419 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 TEX9Q8N6V9 391 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 MAML1Q92585 1016 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 ALG3Q92685 438 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 CCDC47Q96A33 483 aaKnown RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 PTCD3Q96EY7 689 aaKnown RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 CCDC42Q96M95 316 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms