RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 CA14Q9ULX7 337 aa16.86■□□□□ 0.29
SMAD5-205ENST00000509297 MAFFQ9ULX9 164 aa16.86■□□□□ 0.29
SMAD5-205ENST00000509297 H0YCG3 227 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 H7C4K7 107 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 I3L4J1 428 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 STK25O00506 426 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 MEFVO15553 781 aaPredicted RBP16.85■□□□□ 0.29
SMAD5-205ENST00000509297 RFX1P22670 979 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 BRCC3P46736 316 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 SLC12A3P55017 1021 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 OSTNP61366 133 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 ROR1Q01973 937 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 MCL1Q07820 350 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 NOLC1Q14978 699 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMAD5-205ENST00000509297 TMEM119Q4V9L6 283 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 FRMD5Q7Z6J6 570 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 NPAS3Q8IXF0 933 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 TCEAL8Q8IYN2 117 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 ITFG1Q8TB96 612 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 TMX3Q96JJ7 454 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 AK8Q96MA6 479 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 SEMA4AQ9H3S1 761 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 PLEKHA5Q9HAU0 1116 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 DLGAP2Q9P1A6 1054 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 POLIQ9UNA4 740 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 SIT1Q9Y3P8 196 aa16.85■□□□□ 0.29
SMAD5-205ENST00000509297 PTPRZ1P23471 2315 aaPredicted RBP16.85■□□□□ 0.29
SMAD5-205ENST00000509297 FAM186AA6NE01 2351 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 SFI1A8K8P3 1242 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 MICAL2O94851 1124 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 PLA2G4BP0C869 781 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 ATF2P15336 505 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 MCM2P49736 904 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 GPC5P78333 572 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 PFKPQ01813 784 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 SLC10A6Q3KNW5 377 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 TPGS2Q68CL5 300 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 SUSD3Q96L08 255 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 RPP25Q9BUL9 199 aaKnown RBP16.84■□□□□ 0.29
SMAD5-205ENST00000509297 DDX23Q9BUQ8 820 aaKnown RBP16.84■□□□□ 0.29
SMAD5-205ENST00000509297 HCFC1R1Q9NWW0 138 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 LARSQ9P2J5 1176 aaKnown RBP16.84■□□□□ 0.29
SMAD5-205ENST00000509297 NUB1Q9Y5A7 615 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 GVINP1Q7Z2Y8 2422 aa16.84■□□□□ 0.29
SMAD5-205ENST00000509297 WDR27A2RRH5 827 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 VWA3AA6NCI4 1184 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 H3BQV1 296 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 CLDN3O15551 220 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 ECI2O75521 394 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 GJB2P29033 226 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 NCKAP1LP55160 1127 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 PRKCQQ04759 706 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 TRIP11Q15643 1979 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 KYAT1Q16773 422 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 APPL2Q8NEU8 664 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 PJA1Q8NG27 643 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 C18orf25Q96B23 403 aaPredicted RBP16.83■□□□□ 0.28
SMAD5-205ENST00000509297 CDK5RAP3Q96JB5 506 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 ZBTB45Q96K62 511 aaPredicted RBP16.83■□□□□ 0.28
SMAD5-205ENST00000509297 TSPAN18Q96SJ8 248 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 OSBPL6Q9BZF3 934 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 SPTBN4Q9H254 2564 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 ODF2LQ9ULJ1 636 aa16.83■□□□□ 0.28
SMAD5-205ENST00000509297 MRPS23Q9Y3D9 190 aaKnown RBP16.83■□□□□ 0.28
SMAD5-205ENST00000509297 DOCK6Q96HP0 2047 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 LRG1P02750 347 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 RHOP08100 348 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 CLTAP09496 248 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 PTPN2P17706 415 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 ELF1P32519 619 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 ZRSR1Q15695 479 aaKnown RBP16.82■□□□□ 0.28
SMAD5-205ENST00000509297 ARSHQ5FYA8 562 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 OXCT2Q9BYC2 517 aaPredicted RBP16.82■□□□□ 0.28
SMAD5-205ENST00000509297 ANKFY1Q9P2R3 1169 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 FBXL5Q9UKA1 691 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 NOTCH4Q99466 2003 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 FRYLO94915 3013 aa16.82■□□□□ 0.28
SMAD5-205ENST00000509297 TTC26A0AVF1 554 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 PRRG1O14668 218 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 BMP15O95972 392 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 HARSP12081 509 aaKnown RBP16.81■□□□□ 0.28
SMAD5-205ENST00000509297 CYP3A5P20815 502 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 LRPAP1P30533 357 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 ZNF131P52739 623 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 RAD51AP2Q09MP3 1159 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 ZBTB6Q15916 424 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 ZNF280DQ6N043 979 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 TBC1D32Q96NH3 1257 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 PCDHB8Q9UN66 801 aa16.81■□□□□ 0.28
SMAD5-205ENST00000509297 CITO14578 2027 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 KANSL1LA0AUZ9 987 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 M0QZQ0 153 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 ZNF197O14709 1029 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 OAZ2O95190 189 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 PIGRP01833 764 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
SMAD5-205ENST00000509297 ADRB2P07550 413 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 ABCD1P33897 745 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 MCM4P33991 863 aa16.8■□□□□ 0.28
SMAD5-205ENST00000509297 UBA7P41226 1012 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms