RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ADORA2BP29275 332 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 DHPSP49366 369 aaPredicted RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 SLC26A2P50443 739 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF200P98182 395 aaPredicted RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 PTK2BQ14289 1009 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 STARD3Q14849 445 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 INAQ16352 499 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 BROXQ5VW32 411 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF746Q6NUN9 644 aaPredicted RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 CEP128Q6ZU80 1094 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 NEK9Q8TD19 979 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 PPP4R1Q8TF05 950 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 SPATA17Q96L03 361 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 MUC3BQ9H195 1237 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 NRDE2Q9H7Z3 1164 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 CYP26B1Q9NR63 512 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 BARHL2Q9NY43 387 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 SERTAD1Q9UHV2 236 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 HEMK1Q9Y5R4 338 aaPredicted RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 SFI1A8K8P3 1242 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SCAMP3O14828 347 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 CA3P07451 260 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 COL1A2P08123 1366 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 INSRRP14616 1297 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 PTGS1P23219 599 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 AXLP30530 894 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 EFNA5P52803 228 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 NRLP54845 237 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 CALCOCO2Q13137 446 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 LDLRAD1Q5T700 205 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 MICAL3Q7RTP6 2002 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 CCDC25Q86WR0 208 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 MYLK4Q86YV6 388 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 REPS2Q8NFH8 660 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 ATP2A3Q93084 1043 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 AHCYL2Q96HN2 611 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 CCDC42Q96M95 316 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 NUSAP1Q9BXS6 441 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 CELF4Q9BZC1 486 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SFMBT1Q9UHJ3 866 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 STRIP2Q9ULQ0 834 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 PHF24Q9UPV7 400 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 DNAJC6O75061 913 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 RNF8O76064 485 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 URI1O94763 535 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 CFIP05156 583 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 GSTA1P08263 222 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 GSTA2P09210 222 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 OCM2P0CE71 109 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 OCMP0CE72 109 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 CRYBB1P53674 252 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 RNASE9P60153 205 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 PRPSAP1Q14558 356 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SUZ12Q15022 739 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 IQCB1Q15051 598 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 ELF2Q15723 593 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SHROOM1Q2M3G4 852 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF792Q3KQV3 632 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 XKR3Q5GH77 459 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SEL1L2Q5TEA6 688 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 BRAPQ7Z569 592 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF410Q86VK4 478 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 LPPQ93052 612 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 DNAJC7Q99615 494 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 PRRX2Q99811 253 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 RSAD1Q9HA92 442 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SLC38A10Q9HBR0 1119 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 FAM217BQ9NTX9 383 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 QPCTLQ9NXS2 382 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 BAG5Q9UL15 447 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SRPRBQ9Y5M8 271 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 KIF2AO00139 706 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 PPFIA2O75334 1257 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SLC4A1P02730 911 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 FGFR1P11362 822 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 AKAP5P24588 427 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 ATICP31939 592 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 GJA9P57773 515 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 RHBDL3P58872 404 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 NOP14P78316 857 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 PFKFB3Q16875 520 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 LGSNQ5TDP6 509 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 MEI1Q5TIA1 1274 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 PADI6Q6TGC4 694 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 TAOK1Q7L7X3 1001 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 LMNTD2Q8IXW0 634 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 GIMAP1Q8WWP7 306 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SMG7Q92540 1137 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 STMN4Q9H169 189 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 LY9Q9HBG7 655 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 TUFT1Q9NNX1 390 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 MAN1C1Q9NR34 630 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 KCNH7Q9NS40 1196 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 DZANK1Q9NVP4 752 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SNTG2Q9NY99 539 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 RBPJLQ9UBG7 517 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 MTRF1LQ9UGC7 380 aaKnown RBP3.15□□□□□ -1.91
NEDD4-208ENST00000508342 ST3GAL5Q9UNP4 418 aa3.15□□□□□ -1.91
NEDD4-208ENST00000508342 SF3B1O75533 1304 aaKnown RBP eCLIP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms