RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SLC39A4Q6P5W5 647 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 SYCP3Q8IZU3 236 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 POMGNT1Q8WZA1 660 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 CACNG4Q9UBN1 327 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 NR2E1Q9Y466 385 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 TCF20Q9UGU0 1960 aaKnown RBP21.63■■□□□ 1.05
SFXN1-209ENST00000508290 EIF3DO15371 548 aaKnown RBP eCLIP21.62■■□□□ 1.05
SFXN1-209ENST00000508290 SLFN14P0C7P3 912 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 GARTP22102 1010 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 LRPAP1P30533 357 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 ASIC1P78348 528 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 SOX4Q06945 474 aaPredicted RBP21.62■■□□□ 1.05
SFXN1-209ENST00000508290 ZBTB6Q15916 424 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 SEZ6Q53EL9 994 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 RTL10Q7L3V2 364 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 CEP57Q86XR8 500 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 NT5DC4Q86YG4 428 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 LNX1Q8TBB1 728 aaPredicted RBP21.62■■□□□ 1.05
SFXN1-209ENST00000508290 KIF12Q96FN5 646 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 GOLGA2P5Q9HBQ8 144 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 ZDHHC7Q9NXF8 308 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 C2CD2Q9Y426 696 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 BACE2Q9Y5Z0 518 aa21.62■■□□□ 1.05
SFXN1-209ENST00000508290 UBE4BO95155 1302 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 PVALEFA0A1B0GWK0 134 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 LOC730098B7Z3J9 87 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 ANKRD63C9JTQ0 380 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 MEFVO15553 781 aaPredicted RBP21.61■■□□□ 1.05
SFXN1-209ENST00000508290 PAPLNO95428 1278 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 RARS2Q5T160 578 aaKnown RBP21.61■■□□□ 1.05
SFXN1-209ENST00000508290 UNC13DQ70J99 1090 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 GPR149Q86SP6 731 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 BEST2Q8NFU1 509 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 B3GALT6Q96L58 329 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 MAN1C1Q9NR34 630 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 TBC1D7Q9P0N9 293 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 MTRRQ9UBK8 725 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 MUC3AQ02505 3323 aa21.61■■□□□ 1.05
SFXN1-209ENST00000508290 ARHGEF37A1IGU5 675 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 LACTBL1A8MY62 500 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 IL18RAPO95256 599 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 TNFSF9P41273 254 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 SNRPFP62306 86 aaKnown RBP21.6■■□□□ 1.05
SFXN1-209ENST00000508290 LILRA6Q6PI73 481 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 APPL2Q8NEU8 664 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 STAMQ92783 540 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 C18orf25Q96B23 403 aaPredicted RBP21.6■■□□□ 1.05
SFXN1-209ENST00000508290 SUSD3Q96L08 255 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 OXCT2Q9BYC2 517 aaPredicted RBP21.6■■□□□ 1.05
SFXN1-209ENST00000508290 CD320Q9NPF0 282 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 USTQ9Y2C2 406 aa21.6■■□□□ 1.05
SFXN1-209ENST00000508290 FAM237AA0A1B0GTK4 181 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 A0A1W2PQ27 194 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 A0A1W2PQ64 194 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 A0A1W2PQD8 194 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 PI4K2BG5E9Z4 385 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 H7C4K7 107 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 TGM5O43548 720 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 MYBP10242 640 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 RAB33AQ14088 237 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 FAM26FQ5R3K3 315 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 SPATA1Q5VX52 437 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 PRSS55Q6UWB4 352 aaPredicted RBP21.59■■□□□ 1.05
SFXN1-209ENST00000508290 CD300LGQ6UXG3 332 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 C3orf58Q8NDZ4 430 aa21.59■■□□□ 1.05
SFXN1-209ENST00000508290 CITO14578 2027 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 PFKFB1P16118 471 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 ADSSP30520 456 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 MCM4P33991 863 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 CASP5P51878 434 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 TMEM132DQ14C87 1099 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 ZBTB41Q5SVQ8 909 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 LIN9Q5TKA1 542 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 PALB2Q86YC2 1186 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 KREMEN2Q8NCW0 462 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 CCDC34Q96HJ3 373 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 CLSTN3Q9BQT9 956 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 APOL5Q9BWW9 433 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 KIAA1586Q9HCI6 787 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 TUBGCP4Q9UGJ1 667 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 FBXW11Q9UKB1 542 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 HPSEQ9Y251 543 aa21.58■■□□□ 1.05
SFXN1-209ENST00000508290 DCXO43602 365 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 HNRNPA1P09651 372 aaKnown RBP eCLIP21.57■■□□□ 1.04
SFXN1-209ENST00000508290 HOXA9P31269 272 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 AARSP49588 968 aaKnown RBP eCLIP21.57■■□□□ 1.04
SFXN1-209ENST00000508290 ACOT2P49753 483 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 SLC8B1Q6J4K2 584 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 TMC5Q6UXY8 1006 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 CCDC149Q6ZUS6 474 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 RPGRIP1Q96KN7 1286 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 CGNQ9P2M7 1197 aaKnown RBP21.57■■□□□ 1.04
SFXN1-209ENST00000508290 MAFFQ9ULX9 164 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 PCDHB8Q9UN66 801 aa21.57■■□□□ 1.04
SFXN1-209ENST00000508290 ACTN4O43707 911 aaKnown RBP21.56■■□□□ 1.04
SFXN1-209ENST00000508290 EXTL3O43909 919 aa21.56■■□□□ 1.04
SFXN1-209ENST00000508290 POU2F2P09086 479 aa21.56■■□□□ 1.04
SFXN1-209ENST00000508290 TKTP29401 623 aaKnown RBP21.56■■□□□ 1.04
SFXN1-209ENST00000508290 SYKP43405 635 aa21.56■■□□□ 1.04
SFXN1-209ENST00000508290 BRCC3P46736 316 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms