RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 PLA2G4BP0C869 781 aa26.99■■□□□ 1.91
HERC4-212ENST00000505760 RPL9P32969 192 aaKnown RBP26.99■■□□□ 1.91
HERC4-212ENST00000505760 ANGPT1Q15389 498 aa26.99■■□□□ 1.91
HERC4-212ENST00000505760 VARS2Q5ST30 1063 aaKnown RBP26.99■■□□□ 1.91
HERC4-212ENST00000505760 ARL6IP4Q66PJ3 421 aaKnown RBP26.99■■□□□ 1.91
HERC4-212ENST00000505760 TMEM161BQ8NDZ6 487 aa26.99■■□□□ 1.91
HERC4-212ENST00000505760 ITFG1Q8TB96 612 aa26.99■■□□□ 1.91
HERC4-212ENST00000505760 C18orf25Q96B23 403 aaPredicted RBP26.99■■□□□ 1.91
HERC4-212ENST00000505760 RPP25Q9BUL9 199 aaKnown RBP26.99■■□□□ 1.91
HERC4-212ENST00000505760 PDCD11Q14690 1871 aaKnown RBP26.99■■□□□ 1.91
HERC4-212ENST00000505760 NOTCH4Q99466 2003 aa26.99■■□□□ 1.91
HERC4-212ENST00000505760 WDR87Q6ZQQ6 2873 aa26.99■■□□□ 1.91
HERC4-212ENST00000505760 RIF1Q5UIP0 2472 aaKnown RBP26.98■■□□□ 1.91
HERC4-212ENST00000505760 MAPTP10636 758 aaKnown RBP26.98■■□□□ 1.91
HERC4-212ENST00000505760 ELF1P32519 619 aa26.98■■□□□ 1.91
HERC4-212ENST00000505760 MATR3P43243 847 aaKnown RBP eCLIP26.98■■□□□ 1.91
HERC4-212ENST00000505760 SLC12A3P55017 1021 aa26.98■■□□□ 1.91
HERC4-212ENST00000505760 FRMD5Q7Z6J6 570 aa26.98■■□□□ 1.91
HERC4-212ENST00000505760 ZNF461Q8TAF7 563 aa26.98■■□□□ 1.91
HERC4-212ENST00000505760 DNMT3BQ9UBC3 853 aaKnown RBP26.98■■□□□ 1.91
HERC4-212ENST00000505760 KCNH3Q9ULD8 1083 aa26.98■■□□□ 1.91
HERC4-212ENST00000505760 SYN3O14994 580 aa26.97■■□□□ 1.91
HERC4-212ENST00000505760 CD2BP2O95400 341 aaKnown RBP26.97■■□□□ 1.91
HERC4-212ENST00000505760 ROR1Q01973 937 aa26.97■■□□□ 1.91
HERC4-212ENST00000505760 SEZ6Q53EL9 994 aa26.97■■□□□ 1.91
HERC4-212ENST00000505760 SLC8B1Q6J4K2 584 aa26.97■■□□□ 1.91
HERC4-212ENST00000505760 PHLDB3Q6NSJ2 640 aa26.97■■□□□ 1.91
HERC4-212ENST00000505760 ZPBP2Q6X784 338 aa26.97■■□□□ 1.91
HERC4-212ENST00000505760 ASCL5Q7RTU5 278 aa26.97■■□□□ 1.91
HERC4-212ENST00000505760 LARSQ9P2J5 1176 aaKnown RBP26.97■■□□□ 1.91
HERC4-212ENST00000505760 SMC3Q9UQE7 1217 aa26.97■■□□□ 1.91
HERC4-212ENST00000505760 PRR23AA6NEV1 266 aa26.96■■□□□ 1.91
HERC4-212ENST00000505760 H0YCG3 227 aa26.96■■□□□ 1.91
HERC4-212ENST00000505760 H7C4K7 107 aa26.96■■□□□ 1.91
HERC4-212ENST00000505760 PRRG1O14668 218 aa26.96■■□□□ 1.91
HERC4-212ENST00000505760 CLDN3O15551 220 aa26.96■■□□□ 1.91
HERC4-212ENST00000505760 ARPP19P56211 112 aa26.96■■□□□ 1.91
HERC4-212ENST00000505760 GPC5P78333 572 aa26.96■■□□□ 1.91
HERC4-212ENST00000505760 NKD2Q969F2 451 aaPredicted RBP26.96■■□□□ 1.91
HERC4-212ENST00000505760 BICD1Q96G01 975 aa26.96■■□□□ 1.91
HERC4-212ENST00000505760 MRPS23Q9Y3D9 190 aaKnown RBP26.96■■□□□ 1.91
HERC4-212ENST00000505760 NPHP3-ACAD11A0A0J9YXS1 232 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 LRG1P02750 347 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 MCM4P33991 863 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 MCM2P49736 904 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 CACNB1Q02641 598 aaPredicted RBP26.95■■□□□ 1.9
HERC4-212ENST00000505760 SLC10A6Q3KNW5 377 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 TMEM119Q4V9L6 283 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 SPECC1Q5M775 1068 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 NPAS3Q8IXF0 933 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 ING5Q8WYH8 240 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 SHDQ96IW2 340 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 AK8Q96MA6 479 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 SIT1Q9Y3P8 196 aa26.95■■□□□ 1.9
HERC4-212ENST00000505760 FAM186AA6NE01 2351 aa26.94■■□□□ 1.9
HERC4-212ENST00000505760 WDR27A2RRH5 827 aa26.94■■□□□ 1.9
HERC4-212ENST00000505760 MEFVO15553 781 aaPredicted RBP26.94■■□□□ 1.9
HERC4-212ENST00000505760 ABLIM3O94929 683 aa26.94■■□□□ 1.9
HERC4-212ENST00000505760 UBA7P41226 1012 aa26.94■■□□□ 1.9
HERC4-212ENST00000505760 MCL1Q07820 350 aa26.94■■□□□ 1.9
HERC4-212ENST00000505760 LARP1BQ659C4 914 aaKnown RBP26.94■■□□□ 1.9
HERC4-212ENST00000505760 CALML4Q96GE6 196 aa26.94■■□□□ 1.9
HERC4-212ENST00000505760 SUSD3Q96L08 255 aa26.94■■□□□ 1.9
HERC4-212ENST00000505760 KXD1Q9BQD3 176 aa26.94■■□□□ 1.9
HERC4-212ENST00000505760 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.94■■□□□ 1.9
HERC4-212ENST00000505760 ARHGEF37A1IGU5 675 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 DCNP07585 359 aaKnown RBP26.93■■□□□ 1.9
HERC4-212ENST00000505760 RHOP08100 348 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 ATF2P15336 505 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 CTXN3Q4LDR2 81 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 ARSHQ5FYA8 562 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 TBC1D32Q96NH3 1257 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 CYP4F11Q9HBI6 524 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 TUBGCP4Q9UGJ1 667 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 FBXL5Q9UKA1 691 aa26.93■■□□□ 1.9
HERC4-212ENST00000505760 SLC26A4O43511 780 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 TBC1D4O60343 1298 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 CLTAP09496 248 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 CXCL8P10145 99 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 PTPN2P17706 415 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 NCKAP1LP55160 1127 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 MRPL58Q14197 206 aaKnown RBP26.92■■□□□ 1.9
HERC4-212ENST00000505760 DHX8Q14562 1220 aaKnown RBP26.92■■□□□ 1.9
HERC4-212ENST00000505760 ZNF280DQ6N043 979 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 HAUS6Q7Z4H7 955 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 GPBP1Q86WP2 473 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 TCEAL8Q8IYN2 117 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 APPL2Q8NEU8 664 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 PLEKHA5Q9HAU0 1116 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 GDE1Q9NZC3 331 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 ODF2LQ9ULJ1 636 aa26.92■■□□□ 1.9
HERC4-212ENST00000505760 MIA3Q5JRA6 1907 aa26.91■■□□□ 1.9
HERC4-212ENST00000505760 SNW1Q13573 536 aaKnown RBP26.91■■□□□ 1.9
HERC4-212ENST00000505760 SLC5A9Q2M3M2 681 aa26.91■■□□□ 1.9
HERC4-212ENST00000505760 TPGS2Q68CL5 300 aa26.91■■□□□ 1.9
HERC4-212ENST00000505760 RASSF8Q8NHQ8 419 aa26.91■■□□□ 1.9
HERC4-212ENST00000505760 MCRS1Q96EZ8 462 aa26.91■■□□□ 1.9
HERC4-212ENST00000505760 REEP2Q9BRK0 252 aa26.91■■□□□ 1.9
HERC4-212ENST00000505760 FOXQ1Q9C009 403 aa26.91■■□□□ 1.9
HERC4-212ENST00000505760 HNRNPDLO14979 420 aaKnown RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms