RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 ZBTB41Q5SVQ8 909 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 CYP4A22Q5TCH4 519 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 TPGS2Q68CL5 300 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 IQCEQ6IPM2 695 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 SLC8B1Q6J4K2 584 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 ALKAL1Q6UXT8 129 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 ZNF852Q6ZMS4 543 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 NPAS3Q8IXF0 933 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 C4orf32Q8N8J7 132 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 IGSF22Q8N9C0 903 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 RUBCNQ92622 972 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 SECISBP2LQ93073 1101 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 RPP25Q9BUL9 199 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 FOXQ1Q9C009 403 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 CDT1Q9H211 546 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 GVINP1Q7Z2Y8 2422 aa12.17□□□□□ -0.46
UBE2D3-219ENST00000505207 EP300Q09472 2414 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 HIP1RO75146 1068 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ABLIM3O94929 683 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ATF2P15336 505 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.462e-10■■■■□ 21.8
UBE2D3-219ENST00000505207 PRPHP41219 470 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ARPP19P56211 112 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 OSTNP61366 133 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ECM1Q16610 540 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 MPZL3Q6UWV2 235 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 TCEAL8Q8IYN2 117 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 LEMD2Q8NC56 503 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ST13P5Q8NFI4 369 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ATRIPQ8WXE1 791 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ELSPBP1Q96BH3 223 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 MCRS1Q96EZ8 462 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ZNF512Q96ME7 567 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 KXD1Q9BQD3 176 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 NTPCRQ9BSD7 190 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 DDX23Q9BUQ8 820 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 TARS2Q9BW92 718 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 OXCT2Q9BYC2 517 aaPredicted RBP12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 CXCL16Q9H2A7 254 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 CYP4F11Q9HBI6 524 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 HCFC1R1Q9NWW0 138 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 ARHGAP28Q9P2N2 729 aa12.16□□□□□ -0.46
UBE2D3-219ENST00000505207 MAN2B1O00754 1011 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 SPTLC1O15269 473 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 TOM1L1O75674 476 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 EDN1P05305 212 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 SCP2P22307 547 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 BRCC3P46736 316 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 ROR1Q01973 937 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 ST3GAL1Q11201 340 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 PPP2R5DQ14738 602 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 KYAT1Q16773 422 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 CTXN3Q4LDR2 81 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 ZNF280DQ6N043 979 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 RINT1Q6NUQ1 792 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 CD300LGQ6UXG3 332 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 PDZD4Q76G19 769 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 GPR161Q8N6U8 529 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 SPIRE2Q8WWL2 714 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 ING5Q8WYH8 240 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 DNASE1L2Q92874 299 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 CDK5RAP3Q96JB5 506 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 CORO1BQ9BR76 489 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 PLEKHA5Q9HAU0 1116 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 GOLGA2P5Q9HBQ8 144 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 ZFP14Q9HCL3 533 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 LTB4R2Q9NPC1 389 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 KCND2Q9NZV8 630 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 CNTN3Q9P232 1028 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 PCDHGA2Q9Y5H1 932 aa12.15□□□□□ -0.46
UBE2D3-219ENST00000505207 E9PMD0 336 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 I3L4J1 428 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 SLC16A4O15374 487 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 CLDN3O15551 220 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 GLULP15104 373 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 SDHBP21912 280 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 PROZP22891 400 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 GUCY2CP25092 1073 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 MCM4P33991 863 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 MATR3P43243 847 aaKnown RBP eCLIP12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 RPS9P46781 194 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 CSTF1Q05048 431 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 MRPL58Q14197 206 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 RILPL1Q5EBL4 403 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 ZPBP2Q6X784 338 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 TPRG1Q6ZUI0 275 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 KIAA2013Q8IYS2 634 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 CEP120Q8N960 986 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 IRF7Q92985 503 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 E2F7Q96AV8 911 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 SUSD3Q96L08 255 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 TRMT61BQ9BVS5 477 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 FAM126AQ9BYI3 521 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 GPR88Q9GZN0 384 aa12.14□□□□□ -0.47
UBE2D3-219ENST00000505207 BRD9Q9H8M2 597 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms