RNA–Protein interactions for RNA: ENST00000502415.5

POLR2J3-206, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-206ENST00000502415 ZSCAN31Q96LW9 406 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-206ENST00000502415 ACO2Q99798 780 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-206ENST00000502415 TIPINQ9BVW5 301 aa17.09■□□□□ 0.33
POLR2J3-206ENST00000502415 LTB4R2Q9NPC1 389 aa17.09■□□□□ 0.33
POLR2J3-206ENST00000502415 AVENQ9NQS1 362 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-206ENST00000502415 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
POLR2J3-206ENST00000502415 PCDHGA2Q9Y5H1 932 aa17.09■□□□□ 0.33
POLR2J3-206ENST00000502415 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-206ENST00000502415 LAD1O00515 517 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 BRCC3P46736 316 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 ROR1Q01973 937 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 VARS2Q5ST30 1063 aaKnown RBP17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 TPGS2Q68CL5 300 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 SLC8B1Q6J4K2 584 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 ZNF280DQ6N043 979 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 FBXO18Q8NFZ0 1043 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 DNASE1L2Q92874 299 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 ELSPBP1Q96BH3 223 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 ZNF512Q96ME7 567 aaPredicted RBP17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 CORO1BQ9BR76 489 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 CDT1Q9H211 546 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 BRD9Q9H8M2 597 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 ZFP14Q9HCL3 533 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 POLD4Q9HCU8 107 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 MAFFQ9ULX9 164 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 DOCK6Q96HP0 2047 aa17.08■□□□□ 0.32
POLR2J3-206ENST00000502415 ARHGEF37A1IGU5 675 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 I3L4J1 428 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 ATF2P15336 505 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 MATR3P43243 847 aaKnown RBP eCLIP17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 NPTX2P47972 431 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 CTXN3Q4LDR2 81 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 MPZL3Q6UWV2 235 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 DTHD1Q6ZMT9 781 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 LEMD2Q8NC56 503 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 IRF7Q92985 503 aa17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
POLR2J3-206ENST00000502415 CACNA1IQ9P0X4 2223 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 VWA8A3KMH1 1905 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 HIP1RO75146 1068 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 LRRN2O75325 713 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 MICAL2O94851 1124 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 EDN1P05305 212 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 HARSP12081 509 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 GLULP15104 373 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 KCNE1P15382 129 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 MCM4P33991 863 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 RPS9P46781 194 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 NRLP54845 237 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 ADCY1Q08828 1119 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 PTGDRQ13258 359 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 TCEAL8Q8IYN2 117 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 TRMT61BQ9BVS5 477 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 TARS2Q9BW92 718 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 FAM126AQ9BYI3 521 aaPredicted RBP17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 CXCL16Q9H2A7 254 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 ZSCAN32Q9NX65 697 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 RAB23Q9ULC3 237 aa17.06■□□□□ 0.32
POLR2J3-206ENST00000502415 H0YCG3 227 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 XPOTO43592 962 aaKnown RBP17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 ABLIM3O94929 683 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 CPB1P15086 417 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 CD72P21854 359 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 PLD1Q13393 1074 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 XKR4Q5GH76 650 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 KCTD17Q8N5Z5 321 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 CEP120Q8N960 986 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 IGSF22Q8N9C0 903 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 RMDN1Q96DB5 314 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 CDK5RAP3Q96JB5 506 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 IER2Q9BTL4 223 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 OXCT2Q9BYC2 517 aaPredicted RBP17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 GPR88Q9GZN0 384 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 CNTN3Q9P232 1028 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 INSL5Q9Y5Q6 135 aa17.05■□□□□ 0.32
POLR2J3-206ENST00000502415 TRIP11Q15643 1979 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 VPS13AQ96RL7 3174 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 WDR27A2RRH5 827 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 E9PMD0 336 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 TOM1L1O75674 476 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 CEBPBP17676 345 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 NOLC1Q14978 699 aaKnown RBP eCLIP17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 ZRSR1Q15695 479 aaKnown RBP17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 ECM1Q16610 540 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 ALKAL1Q6UXT8 129 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 USP37Q86T82 979 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 YAF2Q8IY57 180 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 C3orf58Q8NDZ4 430 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 E2F7Q96AV8 911 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 SUSD3Q96L08 255 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 SLITRK6Q9H5Y7 841 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 ASAH2Q9NR71 780 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 HEBP1Q9NRV9 189 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 ARHGAP28Q9P2N2 729 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 ANKFY1Q9P2R3 1169 aa17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 AFF4Q9UHB7 1163 aaKnown RBP17.04■□□□□ 0.32
POLR2J3-206ENST00000502415 FBXL5Q9UKA1 691 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms