RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZBTB21Q9ULJ3 1066 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 GMEB1Q9Y692 573 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 C4AP0C0L4 1744 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 C4BP0C0L5 1744 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 ANKRD36CQ5JPF3 1778 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 TMX2-CTNND1H3BSU7 103 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 TTI1O43156 1089 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PALMO75781 387 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 SCGB1D2O95969 90 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 GH2P01242 217 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PCP11498 1178 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 MZF1P28698 734 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 TECP42680 631 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 MMP13P45452 471 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 GEMIN4P57678 1058 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 TGFB2P61812 414 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 WASHC5Q12768 1159 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PFKFB3Q16875 520 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 BRDTQ58F21 947 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM209AQ5JX71 171 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC174Q6PII3 467 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 DTHD1Q6ZMT9 781 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 MAP7D3Q8IWC1 876 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 IQCF2Q8IXL9 164 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 NIM1KQ8IY84 436 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 RNF168Q8IYW5 571 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 EPS8L1Q8TE68 723 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 FBF1Q8TES7 1133 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 IPCEF1Q8WWN9 437 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 JPH3Q8WXH2 748 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 GJA10Q969M2 543 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 SAMD15Q9P1V8 674 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 RASAL2Q9UJF2 1139 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 A0A1B0GTW7 788 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 VILLO15195 856 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 DDNO94850 711 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC166P0CW27 439 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCNB1P14635 433 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF76P36508 570 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 EIF4A3P38919 411 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 KCNMA1Q12791 1236 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 MTMR2Q13614 643 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 MEA1Q16626 185 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRRC36Q1X8D7 754 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLC44A4Q53GD3 710 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PRAMEF18Q5VWM3 479 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 DAB2IPQ5VWQ8 1189 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 RRAGBQ5VZM2 374 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLFN13Q68D06 897 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PACS1Q6VY07 963 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC80Q76M96 950 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 FBXL16Q8N461 479 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 RNF10Q8N5U6 811 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 ARFGAP2Q8N6H7 521 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PDCD7Q8N8D1 485 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLC43A3Q8NBI5 491 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 RNF169Q8NCN4 708 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PPFIBP2Q8ND30 876 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 VPS37AQ8NEZ2 397 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 NEDD1Q8NHV4 660 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 GAB3Q8WWW8 586 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP6NLQ92738 828 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 OSBPL10Q9BXB5 764 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 IFIH1Q9BYX4 1025 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLC7A5P2Q9GIP4 190 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CDHR5Q9HBB8 845 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 MKS1Q9NXB0 559 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CAPN11Q9UMQ6 739 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP15Q9Y4E8 981 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 TMEM238LA0A1B0GVL6 79 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 USP17L10C9JJH3 530 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CYTH3O43739 400 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 SERPINB7O75635 380 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 RGS20O76081 388 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 UNC5CO95185 931 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 ASMTLO95671 621 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 EEF2P13639 858 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 EPB42P16452 691 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PRCPP42785 496 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 MTTPP55157 894 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 KPNB1Q14974 876 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CNGA2Q16280 664 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 C1orf228Q6PIY5 440 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 C16orf86Q6ZW13 317 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 ENDOVQ8N8Q3 282 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 ANKRD42Q8N9B4 389 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 P3H4Q92791 437 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 GMLQ99445 158 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PHF20Q9BVI0 1012 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 BRINP2Q9C0B6 783 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 INTS9Q9NV88 658 aaKnown RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 SUCLA2Q9P2R7 463 aaPredicted RBP6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 PRKAG3Q9UGI9 489 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 CHKBQ9Y259 395 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 TBC1D30Q9Y2I9 924 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM205AQ6ZU69 1335 aa6.14□□□□□ -1.43
SOX2-OT-218ENST00000498731 NHSQ6T4R5 1651 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms