RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 BAZ2BQ9UIF8 2168 aaKnown RBP5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 ABCB11O95342 1321 aa5.94□□□□□ -1.46
HMGXB4-208ENST00000498325 ZC3H12DA2A288 527 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 VWA3AA6NCI4 1184 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 PI4K2BG5E9Z4 385 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 GCOM1H8Y6P7 765 aaPredicted RBP5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 GIPC1O14908 333 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 N4BP3O15049 544 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 ADAMTS3O15072 1205 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 POLR2DO15514 142 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 NEMFO60524 1076 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 PPP1R11O60927 126 aaPredicted RBP5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 OR52Z1P0C646 297 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 POLR2MP0CAP2 368 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 INSRRP14616 1297 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 UBA7P41226 1012 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 EPHB4P54760 987 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 BACE1P56817 501 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 PLP2Q04941 152 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 SPP2Q13103 211 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 PDIA5Q14554 519 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 PUM1Q14671 1186 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 STX1AQ16623 288 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 TMEM266Q2M3C6 531 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 USH1GQ495M9 461 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 KIAA1755Q5JYT7 1200 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 PPP4R3AQ6IN85 833 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 CCDC174Q6PII3 467 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 MOXD1Q6UVY6 613 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 KRBA2Q6ZNG9 492 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 ERO1BQ86YB8 467 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 MCF2L2Q86YR7 1114 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 C4orf32Q8N8J7 132 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 IQUBQ8NA54 791 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 FBF1Q8TES7 1133 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 BADQ92934 168 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 ZKSCAN4Q969J2 545 aaPredicted RBP5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 C12orf42Q96LP6 360 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 FUCA2Q9BTY2 467 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 TANGO6Q9C0B7 1094 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 TMEM260Q9NX78 707 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 MAP3K20Q9NYL2 800 aaKnown RBP5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 RABGAP1Q9Y3P9 1069 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 ZHX2Q9Y6X8 837 aa5.93□□□□□ -1.46
HMGXB4-208ENST00000498325 USP34Q70CQ2 3546 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 DOCK1Q14185 1865 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 CYP3A7-CYP3A51PA0A087WV96 503 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 TNPO2O14787 897 aaKnown RBP5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 TREHO43280 583 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 FLOT1O75955 427 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 SMC2O95347 1197 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 CFBP00751 764 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 ICAM1P05362 532 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 CYP3A7P24462 503 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 ZNF76P36508 570 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 SNAP25P60880 206 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 TEKQ02763 1124 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 GRIN1Q05586 938 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 KCNA1Q09470 495 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 PPIL2Q13356 520 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 CALCRLQ16602 461 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 UBE2SQ16763 222 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 LONRF3Q496Y0 759 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 SPECC1Q5M775 1068 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 CNKSR3Q6P9H4 555 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 USP17L6PQ6QN14 398 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 SV2BQ7L1I2 683 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 FRMD5Q7Z6J6 570 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 NLRX1Q86UT6 975 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 CCDC84Q86UT8 332 aaPredicted RBP5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 MCATQ8IVS2 390 aaKnown RBP5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 RASSF8Q8NHQ8 419 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 LINC01599Q8WXQ3 324 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 EPSTI1Q96J88 318 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 BDH2Q9BUT1 245 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 ANO3Q9BYT9 981 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 PANK2Q9BZ23 570 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 CCSER1Q9C0I3 900 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 RPAP3Q9H6T3 665 aaPredicted RBP5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 CNTD2Q9H8S5 307 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 LUC7LQ9NQ29 371 aaKnown RBP5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 HOXC10Q9NYD6 342 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 DDX25Q9UHL0 483 aaKnown RBP5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 MRVI1Q9Y6F6 885 aa5.92□□□□□ -1.46
HMGXB4-208ENST00000498325 SMTNL1A8MU46 457 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 BECN2A8MW95 431 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 GOLGA6L19H0YKK7 550 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 MEIS2O14770 477 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 TBX3O15119 743 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 SLC26A4O43511 780 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 HMGCRP04035 888 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 CYP3A4P08684 503 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 VCAM1P19320 739 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 VIPR1P32241 457 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 ZNF165P49910 485 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 OAZ1P54368 228 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 TPM4P67936 248 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 AMPD3Q01432 767 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 PPATQ06203 517 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms