RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 FSCN2O14926 492 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 ATG7O95352 703 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 ARL2P36404 184 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 SSR1P43307 286 aaKnown RBP11.96□□□□□ -0.49
CHMP3-209ENST00000494623 NAMPTP43490 491 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 CUL2Q13617 745 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 SLFN12LQ6IEE8 588 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 EEPD1Q7L9B9 569 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 OR5B17Q8NGF7 314 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 HEMGNQ9BXL5 484 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 AZI2Q9H6S1 392 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 LRRC19Q9H756 370 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 CHST7Q9NS84 486 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 STYXL1Q9Y6J8 313 aa11.96□□□□□ -0.49
CHMP3-209ENST00000494623 FAM107AO95990 144 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 EDN1P05305 212 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 NUDT17P0C025 328 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ACO1P21399 889 aaKnown RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 GBP1P32455 592 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ABCD1P33897 745 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 SLCO1A2P46721 670 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 FNTAP49354 379 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 CALCOCO2Q13137 446 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 TRIP13Q15645 432 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ZNF677Q86XU0 584 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 CCDC50Q8IVM0 306 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 PPM1EQ8WY54 764 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 RAPGEF5Q92565 580 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ART4Q93070 314 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 RUNDC3BQ96NL0 473 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 USTQ9Y2C2 406 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 PHIPQ8WWQ0 1821 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 RLFQ13129 1914 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 DOCK1Q14185 1865 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 GSTTP1A0A1W2PQM5 241 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 CYP1A1P04798 512 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 GNA15P30679 374 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 KRT17Q04695 432 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ENPEPQ07075 957 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 TREML2Q5T2D2 321 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ZBTB33Q86T24 672 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 TLCD1Q96CP7 247 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 HERPUD2Q9BSE4 406 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 TCHPQ9BT92 498 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 AVENQ9NQS1 362 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ADAM22Q9P0K1 906 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ASIC3Q9UHC3 531 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 NUB1Q9Y5A7 615 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 WDR81Q562E7 1941 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 UMODL1Q5DID0 1318 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 O00370 1275 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 RGS16O15492 202 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 THAP12O43422 761 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 TRAPPC3O43617 180 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 KIAA0754O94854 1291 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 GJB6O95452 261 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 LDHAP00338 332 aaKnown RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 MYBL1P10243 752 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ICAM3P32942 547 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 GJC1P36383 396 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 SLC1A1P43005 524 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ALDH5A1P51649 535 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 IFI35P80217 286 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 CENPCQ03188 943 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 DRP2Q13474 957 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 LIN9Q5TKA1 542 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 TADA2BQ86TJ2 420 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 ABRAQ8N0Z2 381 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 OTUD6BQ8N6M0 293 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 C12orf50Q8NA57 414 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 CHST13Q8NET6 341 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 DNERQ8NFT8 737 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 TRIM11Q96F44 468 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 PCYT2Q99447 389 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 FAM118BQ9BPY3 351 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 SELENOSQ9BQE4 189 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 NIFKQ9BYG3 293 aaKnown RBP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 NRBP2Q9NSY0 501 aa11.95□□□□□ -0.5
CHMP3-209ENST00000494623 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP3-209ENST00000494623 PARP14Q460N5 1801 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 A0A0B4J269 797 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 RARGP13631 454 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 UBA1P22314 1058 aaKnown RBP11.94□□□□□ -0.5
CHMP3-209ENST00000494623 NF2P35240 595 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 STAT5BP51692 787 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 HIRAP54198 1017 aaPredicted RBP11.94□□□□□ -0.5
CHMP3-209ENST00000494623 BYSLQ13895 437 aaKnown RBP11.94□□□□□ -0.5
CHMP3-209ENST00000494623 SLMAPQ14BN4 828 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 RNF187Q5TA31 235 aaPredicted RBP11.94□□□□□ -0.5
CHMP3-209ENST00000494623 MON1BQ7L1V2 547 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 NCAPG2Q86XI2 1143 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 RBBP8NLQ8NC74 664 aaPredicted RBP11.94□□□□□ -0.5
CHMP3-209ENST00000494623 BTBD7Q9P203 1132 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 RIPK2O43353 540 aa11.94□□□□□ -0.5
CHMP3-209ENST00000494623 USP2O75604 605 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms