RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 LMBRD2Q68DH5 695 aaPredicted RBP17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 GRK7Q8WTQ7 553 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 ATP6V0A1Q93050 837 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 HOMER3Q9NSC5 361 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 SAMD15Q9P1V8 674 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 ARHGAP28Q9P2N2 729 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 ZNRF3Q9ULT6 936 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 VWA5AO00534 786 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 ZBED4O75132 1171 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 DGAT1O75907 488 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 PROSCO94903 275 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 GAS8O95995 478 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 NR3C2P08235 984 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 KCNA2P16389 499 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 CCND2P30279 289 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 MTMR2Q13614 643 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 VSTM1Q6UX27 236 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 BICD1Q96G01 975 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 SLC12A4Q9UP95 1085 aa17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 COL11A1P12107 1806 aaPredicted RBP17.18■□□□□ 0.34
SEMA4D-220ENST00000492386 CHUKO15111 745 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 EXTL3O43909 919 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 SORBS3O60504 671 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 ATF2P15336 505 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 ACO1P21399 889 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 NSFP46459 744 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 KYNUQ16719 465 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 ZACNQ401N2 412 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 SWSAP1Q6NVH7 229 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 PARP9Q8IXQ6 854 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 ATL2Q8NHH9 583 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 DNAJC17Q9NVM6 304 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 CTNNAL1Q9UBT7 734 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 CTDP1Q9Y5B0 961 aaPredicted RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 TNS1Q9HBL0 1735 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 TMEM120BA0PK00 339 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 RGS20O76081 388 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 OAS1P00973 400 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 HLA-DRAP01903 254 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 C4BPAP04003 597 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 CFHP08603 1231 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 RALAP11233 206 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 BPIFB4P59827 614 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 CAV1Q03135 178 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 PSMD6Q15008 389 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 LRRC14Q15048 493 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 TDRD10Q5VZ19 366 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 ZKSCAN4Q969J2 545 aaPredicted RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 ATG4CQ96DT6 458 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 PWWP2AQ96N64 755 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 TRAIPQ9BWF2 469 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 HEMGNQ9BXL5 484 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 NSRP1Q9H0G5 558 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 ANAPC5Q9UJX4 755 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 PTPRJQ12913 1337 aa17.17■□□□□ 0.34
SEMA4D-220ENST00000492386 TCEA3O75764 348 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 DSG3P32926 999 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 ADCY8P40145 1251 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 WDR44Q5JSH3 913 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 SPOPLQ6IQ16 392 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 ATP6V0A4Q9HBG4 840 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 CYP26B1Q9NR63 512 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 NINJ2Q9NZG7 142 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 SEPT9Q9UHD8 586 aaPredicted RBP17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 FOXO6A8MYZ6 492 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 MAFGO15525 162 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 PSTPIP1O43586 416 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 SNX3O60493 162 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 VNN1O95497 513 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 PSAPP07602 524 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 GSTA1P08263 222 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 TAS2R40P59535 323 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 CXCL9Q07325 125 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 TRPM8Q7Z2W7 1104 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 FAM228AQ86W67 206 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 CCDC60Q8IWA6 550 aaPredicted RBP17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 MGARPQ8TDB4 240 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 RLFQ13129 1914 aa17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 MYH9P35579 1960 aaKnown RBP17.16■□□□□ 0.34
SEMA4D-220ENST00000492386 ATP5DP30049 168 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 VPS41P49754 854 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 NLRP11P59045 1033 aaKnown RBP17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 PRKCEQ02156 737 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 SNCBQ16143 134 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 ANKS1BQ7Z6G8 1248 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 CCDC50Q8IVM0 306 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 IFT74Q96LB3 600 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 SCLT1Q96NL6 688 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 C11orf70Q9BRQ4 267 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 KIAA1586Q9HCI6 787 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms