RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 PCMTD1Q96MG8 357 aaPredicted RBP14.29□□□□□ -0.12
SNX12-205ENST00000490561 SLC9A7Q96T83 725 aa14.29□□□□□ -0.12
SNX12-205ENST00000490561 NUP58Q9BVL2 599 aa14.29□□□□□ -0.12
SNX12-205ENST00000490561 PLCB1Q9NQ66 1216 aa14.29□□□□□ -0.12
SNX12-205ENST00000490561 RAB20Q9NX57 234 aa14.29□□□□□ -0.12
SNX12-205ENST00000490561 GCNT4Q9P109 453 aa14.29□□□□□ -0.12
SNX12-205ENST00000490561 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNX12-205ENST00000490561 CITO14578 2027 aa14.29□□□□□ -0.12
SNX12-205ENST00000490561 MICAL3Q7RTP6 2002 aa14.29□□□□□ -0.12
SNX12-205ENST00000490561 ZBBXA8MT70 800 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 TEX33O43247 280 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 AP5Z1O43299 807 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 STAU1O95793 577 aaKnown RBP14.28□□□□□ -0.12
SNX12-205ENST00000490561 HLA-DRAP01903 254 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 TPM1P09493 284 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 LRPAP1P30533 357 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 RPL9P32969 192 aaKnown RBP14.28□□□□□ -0.12
SNX12-205ENST00000490561 PBX1P40424 430 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 PNPLA4P41247 253 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 SCNN1GP51170 649 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 PTPRJQ12913 1337 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 NCOA4Q13772 614 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 SYCP1Q15431 976 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 SGSM1Q2NKQ1 1148 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 GLRA4Q5JXX5 417 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 CLLU1OSQ5K130 101 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNX12-205ENST00000490561 C16orf59Q7L2K0 433 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 OTOP2Q7RTS6 562 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 VSTM4Q8IW00 320 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 LRRC43Q8N309 656 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 LRRC52Q8N7C0 313 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 NEK11Q8NG66 645 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 FAXDC2Q96IV6 333 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 ZFP42Q96MM3 310 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 ZNF560Q96MR9 790 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 ZMAT2Q96NC0 199 aaKnown RBP14.28□□□□□ -0.12
SNX12-205ENST00000490561 INTS2Q9H0H0 1204 aaKnown RBP14.28□□□□□ -0.12
SNX12-205ENST00000490561 RNF19AQ9NV58 838 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 INPP5FQ9Y2H2 1132 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 DNAH12Q6ZR08 3092 aa14.28□□□□□ -0.12
SNX12-205ENST00000490561 MEIS3P2A8K0S8 358 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 P4HA1P13674 534 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 RNASELQ05823 741 aaKnown RBP14.27□□□□□ -0.13
SNX12-205ENST00000490561 MYO1EQ12965 1108 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 TUSC3Q13454 348 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 FIGNQ5HY92 759 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 SPECC1LQ69YQ0 1117 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 C1orf127Q8N9H9 656 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 GSTCDQ8NEC7 633 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 TAS1R2Q8TE23 839 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 NT5C1BQ96P26 610 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 FAM193BQ96PV7 902 aaPredicted RBP14.27□□□□□ -0.13
SNX12-205ENST00000490561 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.27□□□□□ -0.13
SNX12-205ENST00000490561 EDEM3Q9BZQ6 932 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 VRTNQ9H8Y1 702 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 FBXL5Q9UKA1 691 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 SIK3Q9Y2K2 1263 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 SLC4A7Q9Y6M7 1214 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 TTC3P53804 2025 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 ANK1P16157 1881 aa14.27□□□□□ -0.13
SNX12-205ENST00000490561 TET1Q8NFU7 2136 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 ANO9A1A5B4 782 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 TBKBP1A7MCY6 615 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 DGKIO75912 1065 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 VNN1O95497 513 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 POMCP01189 267 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 ITGB3P05106 788 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 KRT19P08727 400 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 FGFR1P11362 822 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 PON1P27169 355 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 NAB2Q15742 525 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 C9orf57Q5W0N0 161 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 TRIM65Q6PJ69 517 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 ENOSF1Q7L5Y1 443 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 FMNL3Q8IVF7 1028 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 DRC7Q8IY82 874 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 CMTR2Q8IYT2 770 aaKnown RBP14.26□□□□□ -0.13
SNX12-205ENST00000490561 CASD1Q96PB1 797 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 TMEM175Q9BSA9 504 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 LSM14BQ9BX40 385 aaKnown RBP14.26□□□□□ -0.13
SNX12-205ENST00000490561 FAM124BQ9H5Z6 455 aaPredicted RBP14.26□□□□□ -0.13
SNX12-205ENST00000490561 TBC1D13Q9NVG8 400 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 APEX2Q9UBZ4 518 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 TUBGCP4Q9UGJ1 667 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 AGAP1Q9UPQ3 857 aa14.26□□□□□ -0.13
SNX12-205ENST00000490561 ARHGEF37A1IGU5 675 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 PIRO00625 290 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 CLSTN1O94985 981 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 UPP2O95045 317 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 ASS1P00966 412 aaKnown RBP14.25□□□□□ -0.13
SNX12-205ENST00000490561 TRIM21P19474 475 aaKnown RBP14.25□□□□□ -0.13
SNX12-205ENST00000490561 TBXAS1P24557 533 aaPredicted RBP14.25□□□□□ -0.13
SNX12-205ENST00000490561 POLR2BP30876 1174 aaKnown RBP14.25□□□□□ -0.13
SNX12-205ENST00000490561 MAGEA10P43363 369 aaPredicted RBP14.25□□□□□ -0.13
SNX12-205ENST00000490561 RGS19P49795 217 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 EPHB4P54760 987 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 DEFB103AP81534 67 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 DSC1Q08554 894 aa14.25□□□□□ -0.13
SNX12-205ENST00000490561 KCNMA1Q12791 1236 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms