RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CASP1P29466 404 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 CLCN4P51793 760 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 RTP2Q5QGT7 225 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 FAM26FQ5R3K3 315 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 PDXDC1Q6P996 788 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 UNC13DQ70J99 1090 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 PALB2Q86YC2 1186 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 GPR65Q8IYL9 337 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 GRAMD1CQ8IYS0 662 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 SLC22A17Q8WUG5 538 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 FBXL18Q96ME1 805 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 TSPAN18Q96SJ8 248 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 FGFBP2Q9BYJ0 223 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 RXFP1Q9HBX9 757 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 PRKAG3Q9UGI9 489 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 CPSF3Q9UKF6 684 aaKnown RBP14.55□□□□□ -0.08
CCL28-202ENST00000489442 UBQLN1Q9UMX0 589 aaKnown RBP14.55□□□□□ -0.08
CCL28-202ENST00000489442 STYXL1Q9Y6J8 313 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 ANK1P16157 1881 aa14.55□□□□□ -0.08
CCL28-202ENST00000489442 PVALEFA0A1B0GWK0 134 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 A0A1W2PQ27 194 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 A0A1W2PQ64 194 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 A0A1W2PQD8 194 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 MEFVO15553 781 aaPredicted RBP14.54□□□□□ -0.08
CCL28-202ENST00000489442 FAM189A1O60320 539 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 LDHAP00338 332 aaKnown RBP14.54□□□□□ -0.08
CCL28-202ENST00000489442 RPL17P18621 184 aaKnown RBP14.54□□□□□ -0.08
CCL28-202ENST00000489442 ADSSP30520 456 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 BRCC3P46736 316 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 NDUFA8P51970 172 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 ITIH3Q06033 890 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 CUL4BQ13620 913 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 PSMD5Q16401 504 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 RARS2Q5T160 578 aaKnown RBP14.54□□□□□ -0.08
CCL28-202ENST00000489442 ARMCX5Q6P1M9 558 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 SYCE2Q6PIF2 218 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 PRSS55Q6UWB4 352 aaPredicted RBP14.54□□□□□ -0.08
CCL28-202ENST00000489442 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.54□□□□□ -0.08
CCL28-202ENST00000489442 BEST2Q8NFU1 509 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 PAGE5Q96GU1 130 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 POP1Q99575 1024 aaKnown RBP14.54□□□□□ -0.08
CCL28-202ENST00000489442 FAM213AQ9BRX8 229 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 FNIP2Q9P278 1114 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 TUBGCP4Q9UGJ1 667 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 PLXNA3P51805 1871 aa14.54□□□□□ -0.08
CCL28-202ENST00000489442 MUC3AQ02505 3323 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 I3L4J1 428 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 EIF3DO15371 548 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCL28-202ENST00000489442 ACTN4O43707 911 aaKnown RBP14.53□□□□□ -0.08
CCL28-202ENST00000489442 CYP3A5P20815 502 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 GARTP22102 1010 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 IGFBP6P24592 240 aaPredicted RBP14.53□□□□□ -0.08
CCL28-202ENST00000489442 MCM4P33991 863 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 ANP32AP39687 249 aaKnown RBP14.53□□□□□ -0.08
CCL28-202ENST00000489442 CBX2Q14781 532 aaPredicted RBP14.53□□□□□ -0.08
CCL28-202ENST00000489442 TMEM132DQ14C87 1099 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 JADE1Q6IE81 842 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 ADHFE1Q8IWW8 467 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 GJD3Q8N144 294 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 C12orf76Q8N812 135 aaPredicted RBP14.53□□□□□ -0.08
CCL28-202ENST00000489442 C3orf58Q8NDZ4 430 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 PIK3R5Q8WYR1 880 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 CCDC47Q96A33 483 aaKnown RBP14.53□□□□□ -0.08
CCL28-202ENST00000489442 SAAL1Q96ER3 474 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 CCDC34Q96HJ3 373 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 RIPOR3Q96MK2 946 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 S1PR5Q9H228 398 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 ADAM7Q9H2U9 754 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 PCIF1Q9H4Z3 704 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 ASB7Q9H672 318 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 SLC39A2Q9NP94 309 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 EXOC1Q9NV70 894 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 HPSEQ9Y251 543 aa14.53□□□□□ -0.08
CCL28-202ENST00000489442 IL18RAPO95256 599 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 MYL1P05976 194 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 SPATA31D3P0C874 917 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 FGFR3P22607 806 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 TKTP29401 623 aaKnown RBP14.52□□□□□ -0.08
CCL28-202ENST00000489442 POU5F1Q01860 360 aaKnown RBP14.52□□□□□ -0.08
CCL28-202ENST00000489442 ATAT1Q5SQI0 421 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 TMC5Q6UXY8 1006 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 SPATA31D4Q6ZUB0 917 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 ANKS3Q6ZW76 656 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 LNX1Q8TBB1 728 aaPredicted RBP14.52□□□□□ -0.08
CCL28-202ENST00000489442 ZNF507Q8TCN5 953 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 SFXN1Q9H9B4 322 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 MAN1C1Q9NR34 630 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 DERAQ9Y315 318 aa14.52□□□□□ -0.08
CCL28-202ENST00000489442 GOLGA8IPA6NC78 632 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 GOLGA8JA6NMD2 632 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 TGM5O43548 720 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 ZNF202O95125 648 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 ADRB2P07550 413 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 NFICP08651 508 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 LRPAP1P30533 357 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 OR1D2P34982 312 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 MTHFRP42898 656 aa14.51□□□□□ -0.09
CCL28-202ENST00000489442 GUCY2FP51841 1108 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms