RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 SEPT11Q9NVA2 429 aaKnown RBP7.12□□□□□ -1.27
HDLBP-243ENST00000488923 SALL4Q9UJQ4 1053 aa7.12□□□□□ -1.27
HDLBP-243ENST00000488923 PCDHGC3Q9UN70 934 aa7.12□□□□□ -1.27
HDLBP-243ENST00000488923 STXBP5LQ9Y2K9 1186 aa7.12□□□□□ -1.27
HDLBP-243ENST00000488923 PCDHB2Q9Y5E7 798 aa7.12□□□□□ -1.27
HDLBP-243ENST00000488923 A0A0B4J269 797 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 GOLGA8IPA6NC78 632 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 GLTPD2A6NH11 291 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 GOLGA8JA6NMD2 632 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 PDE2AO00408 941 aaPredicted RBP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 MAGEB2O15479 319 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 CLDN3O15551 220 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 GRIN3BO60391 1043 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 LRRN2O75325 713 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 TOM1L1O75674 476 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 CNMDO75829 334 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 HOXC6P09630 235 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 DLATP10515 647 aaKnown RBP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 TNNI1P19237 187 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 ATP4AP20648 1035 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 USP8P40818 1118 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 PIK3CAP42336 1068 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 TNNT3P45378 269 aaPredicted RBP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 AARSP49588 968 aaKnown RBP eCLIP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 YWHAEP62258 255 aaKnown RBP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 ERVK-9P63128 1117 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 CDR2Q01850 454 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 SP2Q02086 613 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 PRPF4BQ13523 1007 aaKnown RBP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 CUL1Q13616 776 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 LAMC2Q13753 1193 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 MAPK6Q16659 721 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 PTPRNQ16849 979 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 ZACNQ401N2 412 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 ZNF484Q5JVG2 852 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 XP32Q5T750 250 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 ALS2CLQ60I27 953 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 SLC39A4Q6P5W5 647 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 C15orf39Q6ZRI6 1047 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 TRMT1LQ7Z2T5 733 aaKnown RBP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 NT5DC3Q86UY8 548 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 WDR49Q8IV35 697 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 ARHGEF19Q8IW93 802 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 ZNF511Q8NB15 262 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 GPRC5AQ8NFJ5 357 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 HELQQ8TDG4 1101 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 MAIP1Q8WWC4 291 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 CAVIN3Q969G5 261 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 SLC10A4Q96EP9 437 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 SAAL1Q96ER3 474 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 HES6Q96HZ4 224 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 VCPIP1Q96JH7 1222 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 CGRRF1Q99675 332 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 GPR20Q99678 358 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 SH2D3AQ9BRG2 576 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 MSTO1Q9BUK6 570 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 NFKBIZQ9BYH8 718 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 WNT8AQ9H1J5 351 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 EPC1Q9H2F5 836 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 RBAKQ9NYW8 714 aaPredicted RBP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 RBPJLQ9UBG7 517 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 TMEM59LQ9UK28 342 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 AJAP1Q9UKB5 411 aaPredicted RBP7.11□□□□□ -1.27
HDLBP-243ENST00000488923 GTF3C4Q9UKN8 822 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 FZD1Q9UP38 647 aa7.11□□□□□ -1.27
HDLBP-243ENST00000488923 PAPPA2Q9BXP8 1791 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 WDR90Q96KV7 1748 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 COL1A2P08123 1366 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 SMCHD1A6NHR9 2005 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 ADGRA3Q8IWK6 1321 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 IGKV6-21A0A0C4DH24 114 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CCDC66A2RUB6 948 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 A6NNZ2 444 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 TISP43B9A030 160 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 OGTO15294 1046 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 NCK2O43639 380 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CEP104O60308 925 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 OPA1O60313 960 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 BUB1BO60566 1050 aaPredicted RBP7.1□□□□□ -1.27
HDLBP-243ENST00000488923 PHACTR2O75167 634 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 ERLIN2O94905 339 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 UPP2O95045 317 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 FTLP02792 175 aaPredicted RBP7.1□□□□□ -1.27
HDLBP-243ENST00000488923 C4BPAP04003 597 aaKnown RBP7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CYP1A2P05177 515 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CYP11B1P15538 503 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 OAS2P29728 719 aaKnown RBP7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CXCR5P32302 372 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 SLC1A1P43005 524 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 MATR3P43243 847 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDLBP-243ENST00000488923 GTF2A2P52657 109 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CDC42EP1Q00587 391 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 BIRC3Q13489 604 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CAPSQ13938 189 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 TUBB8Q3ZCM7 444 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 LIN9Q5TKA1 542 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CDCA2Q69YH5 1023 aaPredicted RBP7.1□□□□□ -1.27
HDLBP-243ENST00000488923 ACAD10Q6JQN1 1059 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 CCDC62Q6P9F0 684 aa7.1□□□□□ -1.27
HDLBP-243ENST00000488923 TAS1R3Q7RTX0 852 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms