RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 SHDQ96IW2 340 aa28.42■■■□□ 2.14
RNF220-216ENST00000488865 ZBTB45Q96K62 511 aaPredicted RBP28.42■■■□□ 2.14
RNF220-216ENST00000488865 SIT1Q9Y3P8 196 aa28.42■■■□□ 2.14
RNF220-216ENST00000488865 NOTCH4Q99466 2003 aa28.42■■■□□ 2.14
RNF220-216ENST00000488865 MYH15Q9Y2K3 1946 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 ABLIM3O94929 683 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 MAPTP10636 758 aaKnown RBP28.41■■■□□ 2.14
RNF220-216ENST00000488865 SLC12A3P55017 1021 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 STARD6P59095 220 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 GPC5P78333 572 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 ROR1Q01973 937 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 ZPBP2Q6X784 338 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 NPAS3Q8IXF0 933 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 TMX3Q96JJ7 454 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 AVENQ9NQS1 362 aaPredicted RBP28.41■■■□□ 2.14
RNF220-216ENST00000488865 NUB1Q9Y5A7 615 aa28.41■■■□□ 2.14
RNF220-216ENST00000488865 PTPRZ1P23471 2315 aaPredicted RBP28.41■■■□□ 2.14
RNF220-216ENST00000488865 ARHGEF37A1IGU5 675 aa28.4■■■□□ 2.14
RNF220-216ENST00000488865 VWA3AA6NCI4 1184 aa28.4■■■□□ 2.14
RNF220-216ENST00000488865 H7C4K7 107 aa28.4■■■□□ 2.14
RNF220-216ENST00000488865 TBC1D4O60343 1298 aa28.4■■■□□ 2.14
RNF220-216ENST00000488865 RAD51AP2Q09MP3 1159 aa28.4■■■□□ 2.14
RNF220-216ENST00000488865 MRPL58Q14197 206 aaKnown RBP28.4■■■□□ 2.14
RNF220-216ENST00000488865 NOLC1Q14978 699 aaKnown RBP eCLIP28.4■■■□□ 2.14
RNF220-216ENST00000488865 C18orf25Q96B23 403 aaPredicted RBP28.4■■■□□ 2.14
RNF220-216ENST00000488865 CDK5RAP3Q96JB5 506 aa28.4■■■□□ 2.14
RNF220-216ENST00000488865 MRPS23Q9Y3D9 190 aaKnown RBP28.4■■■□□ 2.14
RNF220-216ENST00000488865 MYH11P35749 1972 aa28.4■■■□□ 2.14
RNF220-216ENST00000488865 RIF1Q5UIP0 2472 aaKnown RBP28.4■■■□□ 2.14
RNF220-216ENST00000488865 H3BQV1 296 aa28.39■■■□□ 2.14
RNF220-216ENST00000488865 MEFVO15553 781 aaPredicted RBP28.39■■■□□ 2.14
RNF220-216ENST00000488865 PLA2G4BP0C869 781 aa28.39■■■□□ 2.14
RNF220-216ENST00000488865 HARSP12081 509 aaKnown RBP28.39■■■□□ 2.14
RNF220-216ENST00000488865 ELF1P32519 619 aa28.39■■■□□ 2.14
RNF220-216ENST00000488865 SLC10A6Q3KNW5 377 aa28.39■■■□□ 2.14
RNF220-216ENST00000488865 SUSD3Q96L08 255 aa28.39■■■□□ 2.14
RNF220-216ENST00000488865 DLGAP2Q9P1A6 1054 aa28.39■■■□□ 2.14
RNF220-216ENST00000488865 ANKFY1Q9P2R3 1169 aa28.39■■■□□ 2.14
RNF220-216ENST00000488865 WDR27A2RRH5 827 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 CLDN3O15551 220 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 SLC26A4O43511 780 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 LRG1P02750 347 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 RHOP08100 348 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 ATF2P15336 505 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 GJB2P29033 226 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 MCL1Q07820 350 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 TMEM119Q4V9L6 283 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 TCEAL8Q8IYN2 117 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 KCNN1Q92952 543 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 PLIN2Q99541 437 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 GDE1Q9NZC3 331 aa28.38■■■□□ 2.13
RNF220-216ENST00000488865 LARSQ9P2J5 1176 aaKnown RBP28.38■■■□□ 2.13
RNF220-216ENST00000488865 FAM186AA6NE01 2351 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 H0YCG3 227 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 PRRG1O14668 218 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 DCNP07585 359 aaKnown RBP28.37■■■□□ 2.13
RNF220-216ENST00000488865 PTPN2P17706 415 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 PFKPQ01813 784 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 TPGS2Q68CL5 300 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 PJA1Q8NG27 643 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 AK8Q96MA6 479 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 PLEKHA5Q9HAU0 1116 aa28.37■■■□□ 2.13
RNF220-216ENST00000488865 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.37■■■□□ 2.13
RNF220-216ENST00000488865 PDCD11Q14690 1871 aaKnown RBP28.36■■■□□ 2.13
RNF220-216ENST00000488865 PRKCQQ04759 706 aa28.36■■■□□ 2.13
RNF220-216ENST00000488865 SPECC1Q5M775 1068 aa28.36■■■□□ 2.13
RNF220-216ENST00000488865 APPL2Q8NEU8 664 aa28.36■■■□□ 2.13
RNF220-216ENST00000488865 KXD1Q9BQD3 176 aa28.36■■■□□ 2.13
RNF220-216ENST00000488865 DDX23Q9BUQ8 820 aaKnown RBP28.36■■■□□ 2.13
RNF220-216ENST00000488865 SEMA4AQ9H3S1 761 aa28.36■■■□□ 2.13
RNF220-216ENST00000488865 FBXL5Q9UKA1 691 aa28.36■■■□□ 2.13
RNF220-216ENST00000488865 MAFFQ9ULX9 164 aa28.36■■■□□ 2.13
RNF220-216ENST00000488865 ECI2O75521 394 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 CLTAP09496 248 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 MCM4P33991 863 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 MCM2P49736 904 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 NCKAP1LP55160 1127 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 SLC5A9Q2M3M2 681 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 CTXN3Q4LDR2 81 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 SEZ6Q53EL9 994 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 ARSHQ5FYA8 562 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 ING5Q8WYH8 240 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 TBC1D32Q96NH3 1257 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 FOXQ1Q9C009 403 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 ODF2LQ9ULJ1 636 aa28.35■■■□□ 2.13
RNF220-216ENST00000488865 SCP2P22307 547 aa28.34■■■□□ 2.13
RNF220-216ENST00000488865 ARPP19P56211 112 aa28.34■■■□□ 2.13
RNF220-216ENST00000488865 SNW1Q13573 536 aaKnown RBP28.34■■■□□ 2.13
RNF220-216ENST00000488865 MLF2Q15773 248 aaPredicted RBP28.34■■■□□ 2.13
RNF220-216ENST00000488865 SLC44A4Q53GD3 710 aa28.34■■■□□ 2.13
RNF220-216ENST00000488865 ZNF280DQ6N043 979 aa28.34■■■□□ 2.13
RNF220-216ENST00000488865 C1orf210Q8IVY1 113 aa28.34■■■□□ 2.13
RNF220-216ENST00000488865 CYP4F11Q9HBI6 524 aa28.34■■■□□ 2.13
RNF220-216ENST00000488865 NPHP3-ACAD11A0A0J9YXS1 232 aa28.33■■■□□ 2.13
RNF220-216ENST00000488865 KANSL1LA0AUZ9 987 aa28.33■■■□□ 2.13
RNF220-216ENST00000488865 MICAL2O94851 1124 aa28.33■■■□□ 2.13
RNF220-216ENST00000488865 CD2BP2O95400 341 aaKnown RBP28.33■■■□□ 2.13
RNF220-216ENST00000488865 CENPBP07199 599 aaPredicted RBP28.33■■■□□ 2.13
RNF220-216ENST00000488865 MATR3P43243 847 aaKnown RBP eCLIP28.33■■■□□ 2.13
RNF220-216ENST00000488865 HAUS6Q7Z4H7 955 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms