RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 NSUN7Q8NE18 718 aaKnown RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 CSGALNACT1Q8TDX6 532 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 MAP3K14Q99558 947 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 GCOM2Q9BZD3 368 aaPredicted RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 C8orf33Q9H7E9 229 aaPredicted RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 NCOA5Q9HCD5 579 aaKnown RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 SLC8A2Q9UPR5 921 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 SMC3Q9UQE7 1217 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 PCDHB2Q9Y5E7 798 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 CCDC196A0A1B0GTZ2 297 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 CCDC194A0A1B0GVG4 234 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 SLC38A8A6NNN8 435 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 PATE3B3GLJ2 98 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 F8W810 466 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 ARNTLO00327 626 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 CYTH3O43739 400 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 CDKL5O76039 1030 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 CTDNEP1O95476 244 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 CCNE2O96020 404 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 RHOP08100 348 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 ATP4AP20648 1035 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 GJB2P29033 226 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 ABCG1P45844 678 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 IRX4P78413 519 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 SEMA3BQ13214 749 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 ITGB3BPQ13352 177 aaPredicted RBP9.35□□□□□ -0.91
APTX-228ENST00000486724 SYCP1Q15431 976 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 RTN1Q16799 776 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 UVSSAQ2YD98 709 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 AXDND1Q5T1B0 1012 aaPredicted RBP9.35□□□□□ -0.91
APTX-228ENST00000486724 PDXDC1Q6P996 788 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 CPLX2Q6PUV4 134 aaKnown RBP9.35□□□□□ -0.91
APTX-228ENST00000486724 PRSS55Q6UWB4 352 aaPredicted RBP9.35□□□□□ -0.91
APTX-228ENST00000486724 CYP2U1Q7Z449 544 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 CAMKK1Q8N5S9 505 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 ASB16Q96NS5 453 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 COLEC11Q9BWP8 271 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 GPR62Q9BZJ7 368 aa9.35□□□□□ -0.91
APTX-228ENST00000486724 AVENQ9NQS1 362 aaPredicted RBP9.35□□□□□ -0.91
APTX-228ENST00000486724 RBM28Q9NW13 759 aaKnown RBP9.35□□□□□ -0.91
APTX-228ENST00000486724 STK36Q9NRP7 1315 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 SPDYE3A6NKU9 549 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 SPECC1L-ADORA2AF8WAN1 911 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 CPLX1O14810 134 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 MEFVO15553 781 aaPredicted RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 JAK2O60674 1132 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 ATG13O75143 517 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 TPM3P06753 285 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 IFNAR1P17181 557 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 RXRAP19793 462 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 CDC27P30260 824 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 GBP1P32455 592 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 CTHP32929 405 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 MAPK8P45983 427 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 SOX9P48436 509 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 DSC1Q08554 894 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 HNRNPDQ14103 355 aaKnown RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 GRM4Q14833 912 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 SWSAP1Q6NVH7 229 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 MIS18BP1Q6P0N0 1132 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 POTEHQ6S545 545 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 RTL10Q7L3V2 364 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 TRMT1LQ7Z2T5 733 aaKnown RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 RALGPS2Q86X27 583 aaPredicted RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 RAB11FIP4Q86YS3 637 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 FANCBQ8NB91 859 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 CTCFLQ8NI51 663 aaPredicted RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 ADAMTS14Q8WXS8 1223 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 SMARCD2Q92925 531 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 MXRA8Q9BRK3 442 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 AGO4Q9HCK5 861 aaKnown RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 OGFRQ9NZT2 677 aa9.34□□□□□ -0.91
APTX-228ENST00000486724 EVLQ9UI08 416 aaPredicted RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 BAZ2BQ9UIF8 2168 aaKnown RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 URB1O60287 2271 aaKnown RBP9.34□□□□□ -0.91
APTX-228ENST00000486724 SF3B1O75533 1304 aaKnown RBP eCLIP9.33□□□□□ -0.92
APTX-228ENST00000486724 MYBPHLA2RUH7 354 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 DDX39AO00148 427 aaKnown RBP9.33□□□□□ -0.92
APTX-228ENST00000486724 DCLK1O15075 740 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 CHRM1P11229 460 aaPredicted RBP9.33□□□□□ -0.92
APTX-228ENST00000486724 PDCP20941 246 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 ADD1P35611 737 aaKnown RBP9.33□□□□□ -0.92
APTX-228ENST00000486724 CDC42EP1Q00587 391 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 CFHR1Q03591 330 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 NTRK3Q16288 839 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 PSMD5Q16401 504 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 RTP2Q5QGT7 225 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 PMS2CLQ68D20 193 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 TMTC3Q6ZXV5 915 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 CATSPER4Q7RTX7 472 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 MRPL10Q7Z7H8 261 aaKnown RBP9.33□□□□□ -0.92
APTX-228ENST00000486724 C11orf74Q86VG3 221 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 HDDC3Q8N4P3 179 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 FAM167AQ96KS9 214 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 CLSTN3Q9BQT9 956 aa9.33□□□□□ -0.92
APTX-228ENST00000486724 NUSAP1Q9BXS6 441 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms