RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.48■□□□□ 0.87
NR1H3-219ENST00000476086 HELQQ8TDG4 1101 aa20.48■□□□□ 0.87
NR1H3-219ENST00000476086 TOP1MTQ969P6 601 aa20.48■□□□□ 0.87
NR1H3-219ENST00000476086 INPP5FQ9Y2H2 1132 aa20.48■□□□□ 0.87
NR1H3-219ENST00000476086 DAAM1Q9Y4D1 1078 aa20.48■□□□□ 0.87
NR1H3-219ENST00000476086 ITIH6Q6UXX5 1313 aa20.48■□□□□ 0.87
NR1H3-219ENST00000476086 ZBBXA8MT70 800 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 ZC3H11AO75152 810 aaKnown RBP eCLIP20.47■□□□□ 0.87
NR1H3-219ENST00000476086 FGFR1P11362 822 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 ATICP31939 592 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 RBP5P82980 135 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 RNASELQ05823 741 aaKnown RBP20.47■□□□□ 0.87
NR1H3-219ENST00000476086 NCOA4Q13772 614 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 EPC2Q52LR7 807 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 CLLU1OSQ5K130 101 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 SPECC1LQ69YQ0 1117 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 C16orf59Q7L2K0 433 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 DRC7Q8IY82 874 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 CRIPAKQ8N1N5 446 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 C1orf127Q8N9H9 656 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 EHBP1Q8NDI1 1231 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 GSTCDQ8NEC7 633 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 TAF4BQ92750 862 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 CRACR2AQ9BSW2 395 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 NUP58Q9BVL2 599 aa20.47■□□□□ 0.87
NR1H3-219ENST00000476086 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.47■□□□□ 0.87
NR1H3-219ENST00000476086 GOLGA6L6A8MZA4 724 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 UPP2O95045 317 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 HLA-DRAP01903 254 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 ITGB3P05106 788 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 KRT19P08727 400 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 TPM1P09493 284 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 PBX1P40424 430 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 TRIM14Q14142 442 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 SGSM1Q2NKQ1 1148 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 VSTM4Q8IW00 320 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 NEK11Q8NG66 645 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 TAS1R2Q8TE23 839 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 HERVK_113Q902F9 699 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 DDX27Q96GQ7 796 aaKnown RBP20.46■□□□□ 0.87
NR1H3-219ENST00000476086 FAM81BQ96LP2 452 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 UROC1Q96N76 676 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 FAM193BQ96PV7 902 aaPredicted RBP20.46■□□□□ 0.87
NR1H3-219ENST00000476086 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.46■□□□□ 0.873e-7■■■□□ 18.1
NR1H3-219ENST00000476086 INTS2Q9H0H0 1204 aaKnown RBP20.46■□□□□ 0.87
NR1H3-219ENST00000476086 PLCB1Q9NQ66 1216 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 SIK3Q9Y2K2 1263 aa20.46■□□□□ 0.87
NR1H3-219ENST00000476086 CLSTN1O94985 981 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 POMCP01189 267 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 TRIM21P19474 475 aaKnown RBP20.45■□□□□ 0.86
NR1H3-219ENST00000476086 RFX1P22670 979 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 PON1P27169 355 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 LRPAP1P30533 357 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 RPL9P32969 192 aaKnown RBP20.45■□□□□ 0.86
NR1H3-219ENST00000476086 PNPLA4P41247 253 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 KCNMA1Q12791 1236 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 MYO1EQ12965 1108 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 TUSC3Q13454 348 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 TRIM65Q6PJ69 517 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 LRRC52Q8N7C0 313 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 C18orf25Q96B23 403 aaPredicted RBP20.45■□□□□ 0.86
NR1H3-219ENST00000476086 ZNF560Q96MR9 790 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 NT5C1BQ96P26 610 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 CASD1Q96PB1 797 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 CXCL16Q9H2A7 254 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 RNF19AQ9NV58 838 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 TUBGCP4Q9UGJ1 667 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 AGAP1Q9UPQ3 857 aa20.45■□□□□ 0.86
NR1H3-219ENST00000476086 RBAK-RBAKDNI3L0D1 243 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 DGKIO75912 1065 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 VNN1O95497 513 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 SLC9A1P19634 815 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 PAX3P23760 479 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 POLR2BP30876 1174 aaKnown RBP20.44■□□□□ 0.86
NR1H3-219ENST00000476086 FIGNQ5HY92 759 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 LRRC43Q8N309 656 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 PHOSPHO2Q8TCD6 241 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 FAXDC2Q96IV6 333 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 SLC9A7Q96T83 725 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 LSM14BQ9BX40 385 aaKnown RBP20.44■□□□□ 0.86
NR1H3-219ENST00000476086 MIOSQ9NXC5 875 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 PLAGL2Q9UPG8 496 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 SLC4A7Q9Y6M7 1214 aa20.44■□□□□ 0.86
NR1H3-219ENST00000476086 MKI67P46013 3256 aaKnown RBP20.44■□□□□ 0.86
NR1H3-219ENST00000476086 PTPRSQ13332 1948 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 ANO9A1A5B4 782 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 CARNS1A5YM72 827 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 TBKBP1A7MCY6 615 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 STAU1O95793 577 aaKnown RBP20.43■□□□□ 0.86
NR1H3-219ENST00000476086 CST3P01034 146 aaPredicted RBP20.43■□□□□ 0.86
NR1H3-219ENST00000476086 P4HA1P13674 534 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 AFF1P51825 1210 aaKnown RBP20.43■□□□□ 0.86
NR1H3-219ENST00000476086 EPHB4P54760 987 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 DEFB103AP81534 67 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 NAB2Q15742 525 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 ZNF699Q32M78 642 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 C9orf57Q5W0N0 161 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 TMC6Q7Z403 805 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 PPFIBP1Q86W92 1011 aa20.43■□□□□ 0.86
NR1H3-219ENST00000476086 LMO3Q8TAP4 145 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms