RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 SLC10A5Q5PT55 438 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
PCCB-210ENST00000471595 LRRC31Q6UY01 552 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 SERPINB12Q96P63 405 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 RANBP17Q9H2T7 1088 aaKnown RBP13.67□□□□□ -0.22
PCCB-210ENST00000471595 ASB14A6NK59 587 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 CCT8L1PA6NM43 557 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
PCCB-210ENST00000471595 TSPY1Q01534 308 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 MORF4L2Q15014 288 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 DDX42Q86XP3 938 aaKnown RBP eCLIP13.67□□□□□ -0.22
PCCB-210ENST00000471595 ACTRT1Q8TDG2 376 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 KIF12Q96FN5 646 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 TSSK1BQ9BXA7 367 aa13.67□□□□□ -0.22
PCCB-210ENST00000471595 A0A0A6YYK5 440 aaPredicted RBP13.66□□□□□ -0.22
PCCB-210ENST00000471595 TRIM66O15016 1216 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 MAGEA4P43358 317 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 ACOT2P49753 483 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 BAATQ14032 418 aaPredicted RBP13.66□□□□□ -0.22
PCCB-210ENST00000471595 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 TMEM120BA0PK00 339 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 HLA-DRAP01903 254 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 EMC2Q15006 297 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 WDR72Q3MJ13 1102 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 TNIP3Q96KP6 325 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 ACAP3Q96P50 834 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 ZSWIM1Q9BR11 485 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 UBN1Q9NPG3 1134 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 C19orf81C9J6K1 198 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 MSH4O15457 936 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 KCNN4O15554 427 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 EEF1B2P24534 225 aaKnown RBP13.66□□□□□ -0.22
PCCB-210ENST00000471595 TBX2Q13207 712 aaPredicted RBP13.66□□□□□ -0.22
PCCB-210ENST00000471595 MTMR2Q13614 643 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 FBXW10Q5XX13 1052 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 TWF2Q6IBS0 349 aaKnown RBP13.66□□□□□ -0.22
PCCB-210ENST00000471595 TRIM65Q6PJ69 517 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 C9orf72Q96LT7 481 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 PIK3R2O00459 728 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 NR3C2P08235 984 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 MYL3P08590 195 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 MAPK7Q13164 816 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
PCCB-210ENST00000471595 OLFM3Q96PB7 478 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
PCCB-210ENST00000471595 PABPC3Q9H361 631 aaKnown RBP13.66□□□□□ -0.22
PCCB-210ENST00000471595 PDHA1P08559 390 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.22
PCCB-210ENST00000471595 PGM1P36871 562 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ITGA8P53708 1063 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 MAPRE2Q15555 327 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 KLHL11Q9NVR0 708 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ZNF70Q9UC06 446 aaPredicted RBP13.65□□□□□ -0.22
PCCB-210ENST00000471595 L3MBTL1Q9Y468 752 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ADORA2BP29275 332 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 RBP5P82980 135 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 DNAL1Q4LDG9 190 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ACAD10Q6JQN1 1059 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 BATF3Q9NR55 127 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ZFATQ9P243 1243 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ZNRF3Q9ULT6 936 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ARPP19P56211 112 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 NFX1Q12986 1120 aaKnown RBP13.65□□□□□ -0.22
PCCB-210ENST00000471595 PDCD2Q16342 344 aaPredicted RBP13.65□□□□□ -0.22
PCCB-210ENST00000471595 EXT2Q93063 718 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 XPO7Q9UIA9 1087 aaKnown RBP13.65□□□□□ -0.22
PCCB-210ENST00000471595 IL18RAPO95256 599 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 MCF2P10911 925 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 CCND1P24385 295 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
PCCB-210ENST00000471595 HIC1Q14526 733 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 SLC29A2Q14542 456 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 CCNYL1Q8N7R7 359 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 CAVIN3Q969G5 261 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 TMEM143Q96AN5 459 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 IFT43Q96FT9 208 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 LRRIQ3A6PVS8 624 aaPredicted RBP13.65□□□□□ -0.22
PCCB-210ENST00000471595 CDC42EP1Q00587 391 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 EFTUD2Q15029 972 aaKnown RBP eCLIP13.65□□□□□ -0.221e-8■■■■■ 41.2
PCCB-210ENST00000471595 KIAA1841Q6NSI8 718 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 C4orf22Q6V702 233 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ILDR1Q86SU0 546 aaPredicted RBP13.65□□□□□ -0.22
PCCB-210ENST00000471595 THAP2Q9H0W7 228 aa13.65□□□□□ -0.22
PCCB-210ENST00000471595 ICA1LQ8NDH6 482 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 CATSPER1Q8NEC5 780 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 RUSC1Q9BVN2 902 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 OSBPL1AQ9BXW6 950 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 ANLNQ9NQW6 1124 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 PAK5Q9P286 719 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 PDGFRAP16234 1089 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 SEC24CP53992 1094 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 LRRC23Q53EV4 343 aaPredicted RBP13.64□□□□□ -0.23
PCCB-210ENST00000471595 GJB7Q6PEY0 223 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 FEZF2Q8TBJ5 459 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 FGD4Q96M96 766 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 RSAD1Q9HA92 442 aa13.64□□□□□ -0.23
PCCB-210ENST00000471595 ZC3H7BQ9UGR2 993 aaKnown RBP13.64□□□□□ -0.23
PCCB-210ENST00000471595 MED24O75448 989 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms