RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 C18orf25Q96B23 403 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-206ENST00000466532 RPP25Q9BUL9 199 aaKnown RBP20.95■□□□□ 0.94
COL9A3-206ENST00000466532 ARHGEF3Q9NR81 526 aa20.95■□□□□ 0.94
COL9A3-206ENST00000466532 SLC2A4RGQ9NR83 387 aa20.95■□□□□ 0.94
COL9A3-206ENST00000466532 DNMT3BQ9UBC3 853 aaKnown RBP20.95■□□□□ 0.94
COL9A3-206ENST00000466532 NUB1Q9Y5A7 615 aa20.95■□□□□ 0.94
COL9A3-206ENST00000466532 DMDP11532 3685 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 MEFVO15553 781 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-206ENST00000466532 MAPTP10636 758 aaKnown RBP20.94■□□□□ 0.94
COL9A3-206ENST00000466532 ROR1Q01973 937 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 ANGPT1Q15389 498 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 PABPC1LQ4VXU2 614 aaKnown RBP20.94■□□□□ 0.94
COL9A3-206ENST00000466532 SEZ6Q53EL9 994 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 MTSS1LQ765P7 747 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 ASCL5Q7RTU5 278 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 FRMD5Q7Z6J6 570 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 KCND2Q9NZV8 630 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 FANCMQ8IYD8 2048 aa20.94■□□□□ 0.94
COL9A3-206ENST00000466532 COL4A3Q01955 1670 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 PATJQ8NI35 1801 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 VPS13AQ96RL7 3174 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 NPHP3-ACAD11A0A0J9YXS1 232 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 SYN3O14994 580 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 RPL9P32969 192 aaKnown RBP20.93■□□□□ 0.94
COL9A3-206ENST00000466532 MATR3P43243 847 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL9A3-206ENST00000466532 CACNB1Q02641 598 aaPredicted RBP20.93■□□□□ 0.94
COL9A3-206ENST00000466532 TMEM119Q4V9L6 283 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 SLC8B1Q6J4K2 584 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 PHLDB3Q6NSJ2 640 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 ZPBP2Q6X784 338 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 ZNF461Q8TAF7 563 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 UPF2Q9HAU5 1272 aaKnown RBP20.93■□□□□ 0.94
COL9A3-206ENST00000466532 KCNH3Q9ULD8 1083 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 SMC3Q9UQE7 1217 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 TCHHQ07283 1943 aa20.93■□□□□ 0.94
COL9A3-206ENST00000466532 WDR27A2RRH5 827 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 PRR23AA6NEV1 266 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 H7C4K7 107 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 CLDN3O15551 220 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 ELF1P32519 619 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 MCM4P33991 863 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 ARPP19P56211 112 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 GPC5P78333 572 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 SLC10A6Q3KNW5 377 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 NPAS3Q8IXF0 933 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 ING5Q8WYH8 240 aa20.92■□□□□ 0.94
COL9A3-206ENST00000466532 LARSQ9P2J5 1176 aaKnown RBP20.92■□□□□ 0.94
COL9A3-206ENST00000466532 MRPS23Q9Y3D9 190 aaKnown RBP20.92■□□□□ 0.94
COL9A3-206ENST00000466532 ABLIM3O94929 683 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 LRG1P02750 347 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 MCM2P49736 904 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 NCKAP1LP55160 1127 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 MCL1Q07820 350 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 ARSHQ5FYA8 562 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 SPECC1Q5M775 1068 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 NKD2Q969F2 451 aaPredicted RBP20.91■□□□□ 0.94
COL9A3-206ENST00000466532 BICD1Q96G01 975 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 SUSD3Q96L08 255 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 AK8Q96MA6 479 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 KXD1Q9BQD3 176 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 TUBGCP4Q9UGJ1 667 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 FBXL5Q9UKA1 691 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 SIT1Q9Y3P8 196 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 CFAP54Q96N23 3096 aa20.91■□□□□ 0.94
COL9A3-206ENST00000466532 ARHGEF37A1IGU5 675 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 H0YCG3 227 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 PRRG1O14668 218 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 TBC1D4O60343 1298 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 DCNP07585 359 aaKnown RBP20.9■□□□□ 0.94
COL9A3-206ENST00000466532 CXCL8P10145 99 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 MRPL58Q14197 206 aaKnown RBP20.9■□□□□ 0.94
COL9A3-206ENST00000466532 CTXN3Q4LDR2 81 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 LARP1BQ659C4 914 aaKnown RBP20.9■□□□□ 0.94
COL9A3-206ENST00000466532 HAUS6Q7Z4H7 955 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 CALML4Q96GE6 196 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 TBC1D32Q96NH3 1257 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 HAPLN2Q9GZV7 340 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 ODF2LQ9ULJ1 636 aa20.9■□□□□ 0.94
COL9A3-206ENST00000466532 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-206ENST00000466532 SLC26A4O43511 780 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 RHOP08100 348 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 ATF2P15336 505 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 PTPN2P17706 415 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 UBA7P41226 1012 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 SPAG1Q07617 926 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 DHX8Q14562 1220 aaKnown RBP20.89■□□□□ 0.93
COL9A3-206ENST00000466532 SLC5A9Q2M3M2 681 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 ZNF280DQ6N043 979 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 GPBP1Q86WP2 473 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 DDX12PQ92771 950 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 MCRS1Q96EZ8 462 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 SHDQ96IW2 340 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 REEP2Q9BRK0 252 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 FOXQ1Q9C009 403 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 CYP4F11Q9HBI6 524 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 TSC2P49815 1807 aa20.89■□□□□ 0.93
COL9A3-206ENST00000466532 CACNA1IQ9P0X4 2223 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 SEC24AO95486 1093 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 CLTAP09496 248 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 LIG4P49917 911 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms