RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 BEST2Q8NFU1 509 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 ATOH1Q92858 354 aaPredicted RBP9.66□□□□□ -0.86
LDB1-203ENST00000461873 INTS4Q96HW7 963 aaKnown RBP9.66□□□□□ -0.86
LDB1-203ENST00000461873 ZNF396Q96N95 335 aaPredicted RBP9.66□□□□□ -0.86
LDB1-203ENST00000461873 TSPAN18Q96SJ8 248 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 CLSTN3Q9BQT9 956 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 REEP2Q9BRK0 252 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 OXCT2Q9BYC2 517 aaPredicted RBP9.66□□□□□ -0.86
LDB1-203ENST00000461873 CYP4F11Q9HBI6 524 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 GOLGA2P5Q9HBQ8 144 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 PTPRHQ9HD43 1115 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 CNTN3Q9P232 1028 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 STK17AQ9UEE5 414 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 FBXW11Q9UKB1 542 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 TBX20Q9UMR3 447 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 UBQLN1Q9UMX0 589 aaKnown RBP9.66□□□□□ -0.86
LDB1-203ENST00000461873 BACE2Q9Y5Z0 518 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 C2orf16Q68DN1 1984 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 I3L4J1 428 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 ZNF197O14709 1029 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 OGTO15294 1046 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 EDN1P05305 212 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 CFHP08603 1231 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 CXCL8P10145 99 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 IDEP14735 1019 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 PTPN2P17706 415 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 SYT1P21579 422 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 HOXA9P31269 272 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 BRCC3P46736 316 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 NCKAP1LP55160 1127 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 YWHAHQ04917 246 aaPredicted RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 MCL1Q07820 350 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 CUL4AQ13619 759 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 RAB33AQ14088 237 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 POSTNQ15063 836 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 PABPC1LQ4VXU2 614 aaKnown RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 SEZ6Q53EL9 994 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 VARS2Q5ST30 1063 aaKnown RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 CYP4A22Q5TCH4 519 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 ADALQ6DHV7 355 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 ASTLQ6HA08 431 aaPredicted RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 ARMCX5Q6P1M9 558 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 DYMQ7RTS9 669 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 ALYREFQ86V81 257 aaKnown RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 METTL23Q86XA0 190 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 SIX5Q8N196 739 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 ZNF461Q8TAF7 563 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 NOC3LQ8WTT2 800 aaKnown RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 ASIC4Q96FT7 647 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 SHDQ96IW2 340 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 ZBTB45Q96K62 511 aaPredicted RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 ZNF512Q96ME7 567 aaPredicted RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 RTP3Q9BQQ7 232 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 CCSER1Q9C0I3 900 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 MRPL44Q9H9J2 332 aaKnown RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 EPS15L1Q9UBC2 864 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 MTRRQ9UBK8 725 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 DUSP12Q9UNI6 340 aa9.65□□□□□ -0.86
LDB1-203ENST00000461873 MRPS23Q9Y3D9 190 aaKnown RBP9.65□□□□□ -0.86
LDB1-203ENST00000461873 TECTAO75443 2155 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 STX6O43752 255 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 EFEMP2O95967 443 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 LAMP2P13473 410 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 GAP43P17677 238 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 PROZP22891 400 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 PAX3P23760 479 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 CLCN5P51795 746 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 AMPD3Q01432 767 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 NHLH1Q02575 133 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 MAPK7Q13164 816 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 PLD1Q13393 1074 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 TAF12Q16514 161 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 SPECC1Q5M775 1068 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 TPGS2Q68CL5 300 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 LILRA6Q6PI73 481 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 ALKAL1Q6UXT8 129 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 PDZD4Q76G19 769 aaPredicted RBP9.64□□□□□ -0.87
LDB1-203ENST00000461873 POMGNT1Q8WZA1 660 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 SEL1LQ9UBV2 794 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 WNT16Q9UBV4 365 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 CDH7Q9ULB5 785 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 CA14Q9ULX7 337 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 PCDHB13Q9Y5F0 798 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 SRPRBQ9Y5M8 271 aaKnown RBP9.64□□□□□ -0.87
LDB1-203ENST00000461873 CLIC4Q9Y696 253 aa9.64□□□□□ -0.87
LDB1-203ENST00000461873 GCNT3O95395 438 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 LDHAP00338 332 aaKnown RBP9.63□□□□□ -0.87
LDB1-203ENST00000461873 SRFP11831 508 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 ODC1P11926 461 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 CYP3A5P20815 502 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 ALDH1A3P47895 512 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 MRE11P49959 708 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 PFKPQ01813 784 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 SPAG1Q07617 926 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 TMEM132DQ14C87 1099 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 NAB2Q15742 525 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 SLC10A6Q3KNW5 377 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 ARSHQ5FYA8 562 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 XKR4Q5GH76 650 aa9.63□□□□□ -0.87
LDB1-203ENST00000461873 TAS1R3Q7RTX0 852 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms