RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 PRSS55Q6UWB4 352 aaPredicted RBP24.49■■□□□ 1.51
TRAF4-207ENST00000461195 C3orf58Q8NDZ4 430 aa24.49■■□□□ 1.51
TRAF4-207ENST00000461195 KIF12Q96FN5 646 aa24.49■■□□□ 1.51
TRAF4-207ENST00000461195 CHAMP1Q96JM3 812 aa24.49■■□□□ 1.51
TRAF4-207ENST00000461195 C7orf25Q9BPX7 421 aa24.49■■□□□ 1.51
TRAF4-207ENST00000461195 SFXN1Q9H9B4 322 aa24.49■■□□□ 1.51
TRAF4-207ENST00000461195 C11orf16Q9NQ32 467 aa24.49■■□□□ 1.51
TRAF4-207ENST00000461195 CPSF3Q9UKF6 684 aaKnown RBP24.49■■□□□ 1.51
TRAF4-207ENST00000461195 AGO2Q9UKV8 859 aaKnown RBP24.49■■□□□ 1.51
TRAF4-207ENST00000461195 KCNH3Q9ULD8 1083 aa24.49■■□□□ 1.51
TRAF4-207ENST00000461195 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.49■■□□□ 1.51
TRAF4-207ENST00000461195 LACTBL1A8MY62 500 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 PI4K2BG5E9Z4 385 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 RPL17P18621 184 aaKnown RBP24.48■■□□□ 1.51
TRAF4-207ENST00000461195 FGFR3P22607 806 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 ASIC1P78348 528 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 KCNA1Q09470 495 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 POSTNQ15063 836 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 PSMD5Q16401 504 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 LNX1Q8TBB1 728 aaPredicted RBP24.48■■□□□ 1.51
TRAF4-207ENST00000461195 POMGNT1Q8WZA1 660 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 RIPOR3Q96MK2 946 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 NECTIN4Q96NY8 510 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 TSPAN18Q96SJ8 248 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 IKZF4Q9H2S9 585 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 MAN1C1Q9NR34 630 aa24.48■■□□□ 1.51
TRAF4-207ENST00000461195 MTCL1Q9Y4B5 1905 aaKnown RBP24.47■■□□□ 1.51
TRAF4-207ENST00000461195 XPOTO43592 962 aaKnown RBP24.47■■□□□ 1.51
TRAF4-207ENST00000461195 ADRB2P07550 413 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 MTHFRP42898 656 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 BRCC3P46736 316 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 SPAG1Q07617 926 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 KANK3Q6NY19 840 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 STXBP4Q6ZWJ1 553 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 PALB2Q86YC2 1186 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 GLYCTKQ8IVS8 523 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 CD302Q8IX05 232 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 SYCP3Q8IZU3 236 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 FGFBP2Q9BYJ0 223 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 TUBGCP4Q9UGJ1 667 aa24.47■■□□□ 1.51
TRAF4-207ENST00000461195 UBQLN1Q9UMX0 589 aaKnown RBP24.47■■□□□ 1.51
TRAF4-207ENST00000461195 ARIH1Q9Y4X5 557 aaPredicted RBP24.47■■□□□ 1.51
TRAF4-207ENST00000461195 CMA1P23946 247 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 ACOT2P49753 483 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 ZBTB6Q15916 424 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 TMC5Q6UXY8 1006 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 CEP57L1Q8IYX8 460 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 HDAC7Q8WUI4 952 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 FAM212AQ96EL1 285 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 SCAND2PQ9GZW5 306 aaPredicted RBP24.46■■□□□ 1.51
TRAF4-207ENST00000461195 TMEM206Q9H813 350 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 CDH22Q9UJ99 828 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 NUB1Q9Y5A7 615 aa24.46■■□□□ 1.51
TRAF4-207ENST00000461195 ANK1P16157 1881 aa24.45■■□□□ 1.51
TRAF4-207ENST00000461195 LOC730098B7Z3J9 87 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 I3L4J1 428 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 TGM5O43548 720 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 CYP3A5P20815 502 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 TKTP29401 623 aaKnown RBP24.45■■□□□ 1.5
TRAF4-207ENST00000461195 ADSSP30520 456 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 LRPAP1P30533 357 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 HOXD11P31277 338 aaPredicted RBP24.45■■□□□ 1.5
TRAF4-207ENST00000461195 POU5F1Q01860 360 aaKnown RBP24.45■■□□□ 1.5
TRAF4-207ENST00000461195 ATAT1Q5SQI0 421 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 RPGRIP1Q96KN7 1286 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 CLSTN3Q9BQT9 956 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 PLEKHA4Q9H4M7 779 aa24.45■■□□□ 1.5
TRAF4-207ENST00000461195 PRPF6O94906 941 aaKnown RBP24.44■■□□□ 1.5
TRAF4-207ENST00000461195 WEE2P0C1S8 567 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 SLFN14P0C7P3 912 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 SPATA31D3P0C874 917 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 PFKFB1P16118 471 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 LILRA6Q6PI73 481 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 SPATA31D4Q6ZUB0 917 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 ANKS3Q6ZW76 656 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 UNC13DQ70J99 1090 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 GPR149Q86SP6 731 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 HPS3Q969F9 1004 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 POMKQ9H5K3 350 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 MTRRQ9UBK8 725 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 SERTAD1Q9UHV2 236 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 DERAQ9Y315 318 aa24.44■■□□□ 1.5
TRAF4-207ENST00000461195 A0A1B0GVL5 298 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 GARTP22102 1010 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 MCM4P33991 863 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 AFMP43652 599 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 JADE1Q6IE81 842 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 C15orf39Q6ZRI6 1047 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 CMASQ8NFW8 434 aaPredicted RBP24.43■■□□□ 1.5
TRAF4-207ENST00000461195 BLZF1Q9H2G9 400 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 ASB7Q9H672 318 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 USP25Q9UHP3 1055 aa24.43■■□□□ 1.5
TRAF4-207ENST00000461195 MUC6Q6W4X9 2439 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 C2orf16Q68DN1 1984 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.42■■□□□ 1.5
TRAF4-207ENST00000461195 SYN3O14994 580 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 CASP1P29466 404 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 NUCB2P80303 420 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 TMEM132DQ14C87 1099 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 FAM26FQ5R3K3 315 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms