RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 PCDHB8Q9UN66 801 aa3.3□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 TRAF3IP3Q9Y228 551 aa3.3□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 YBX2Q9Y2T7 364 aaKnown RBP3.3□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MYH11P35749 1972 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 FREM2Q5SZK8 3169 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 LRRIQ4A6NIV6 560 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 HNRNPDLO14979 420 aaKnown RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MGEA5O60502 916 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ZRANB2O95218 330 aaKnown RBP eCLIP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 GH1P01241 217 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 CKBP12277 381 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 HOXD8P13378 290 aaPredicted RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 KRT5P13647 590 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 GAP43P17677 238 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 FECHP22830 423 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ICAM3P32942 547 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 GJC1P36383 396 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 PBX3P40426 434 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ACOT2P49753 483 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 PSEN2P49810 448 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 NKX3-2P78367 333 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MYL7Q01449 175 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 GUCY2DQ02846 1103 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 TRAF1Q13077 416 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MAPK7Q13164 816 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 PPP2R5CQ13362 524 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 HLTFQ14527 1009 aaKnown RBP eCLIP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 CASP8Q14790 479 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 SLC18A3Q16572 532 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 EDRF1Q3B7T1 1238 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 HSP90B2PQ58FF3 399 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 TMEM240Q5SV17 173 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 BEND6Q5SZJ8 279 aaPredicted RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 PHLDB3Q6NSJ2 640 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 EPM2AIP1Q7L775 607 aaPredicted RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 IRF2BP2Q7Z5L9 587 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 FRMD5Q7Z6J6 570 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ZBTB33Q86T24 672 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 DDX42Q86XP3 938 aaKnown RBP eCLIP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 CPNE8Q86YQ8 564 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 CREG2Q8IUH2 290 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ARHGEF19Q8IW93 802 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MSL3Q8N5Y2 521 aaKnown RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 USP38Q8NB14 1042 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ARRDC4Q8NCT1 418 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 EHBP1Q8NDI1 1231 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 SPATA4Q8NEY3 305 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 SLC30A5Q8TAD4 765 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 LINC01599Q8WXQ3 324 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 BSNDQ8WZ55 320 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 POMGNT1Q8WZA1 660 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ZBTB45Q96K62 511 aaPredicted RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 BTBD6Q96KE9 485 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 FAM213AQ9BRX8 229 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 UBE2OQ9C0C9 1292 aaKnown RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 INTS2Q9H0H0 1204 aaKnown RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 AP5M1Q9H0R1 490 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MINDY3Q9H8M7 445 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 EPB41L5Q9HCM4 733 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 KMT5AQ9NQR1 393 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 SNX12Q9UMY4 172 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 FAN1Q9Y2M0 1017 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 JRKLQ9Y4A0 524 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 PCDHGC5Q9Y5F6 944 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 COL4A6Q14031 1691 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MYH9P35579 1960 aaKnown RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 DOCK6Q96HP0 2047 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 A0A1W2PQJ5 194 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ANKRD65E5RJM6 399 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 F8W810 466 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 NOP56O00567 594 aaKnown RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 DDX3XO00571 662 aaKnown RBP eCLIP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 CYP26A1O43174 497 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 B4GALT3O60512 393 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MSCO60682 206 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ADRB2P07550 413 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 H2AFZP0C0S5 128 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 SRGAP2CP0DJJ0 459 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 GHRP10912 638 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 RAG1P15918 1043 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 HOXC8P31273 242 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 TIE1P35590 1138 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 THPOP40225 353 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 SSR1P43307 286 aaKnown RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 NPTX2P47972 431 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 VAMP7P51809 220 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 GALCP54803 685 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 SETQ01105 290 aaPredicted RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 BIRC3Q13489 604 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 RPS6KA1Q15418 735 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 DGKDQ16760 1214 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 KIZQ2M2Z5 673 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 ZNF394Q53GI3 561 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 FIGNQ5HY92 759 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 FAM182AQ5T1J6 154 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 PAPD7Q5XG87 772 aaKnown RBP3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 KCTD16Q68DU8 428 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 MCTP2Q6DN12 878 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 SPOPLQ6IQ16 392 aa3.29□□□□□ -1.88
VSTM2A-OT1-201ENST00000456049 CCDC70Q6NSX1 233 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms