RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 IGSF22Q8N9C0 903 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 RCBTB1Q8NDN9 531 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 PCDH19Q8TAB3 1148 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 NETO1Q8TDF5 533 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 DYNLL2Q96FJ2 89 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 SLF1Q9BQI6 1058 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 RIOK1Q9BRS2 568 aaKnown RBP7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 LRRC4CQ9HCJ2 640 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 AP5S1Q9NUS5 200 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 MTUS1Q9ULD2 1270 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 RIPK3Q9Y572 518 aa7.87□□□□□ -1.15
LSMEM1-203ENST00000455302 ASTN1O14525 1302 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 GRIN2DO15399 1336 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 PNMA6EA0A0J9YXQ4 647 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 CBX4O00257 560 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 WNT9AO14904 365 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 ZBED4O75132 1171 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 IGLV1-40P01703 118 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 SOD2P04179 222 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 GNAI2P04899 355 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 SRGAP2CP0DJJ0 459 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 RFC2P35250 354 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 IL2P60568 153 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 NKX3-2P78367 333 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 ITKQ08881 620 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 LSAMPQ13449 338 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 ARHGAP44Q17R89 818 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 HLA-DQA1Q5Y7H0 255 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 TMED8Q6PL24 325 aaPredicted RBP7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 SPRED2Q7Z698 418 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 C11orf74Q86VG3 221 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 CREG2Q8IUH2 290 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 FMNL3Q8IVF7 1028 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 FAM181AQ8N9Y4 354 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 SHKBP1Q8TBC3 707 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 SDR42E1Q8WUS8 393 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 FBXW5Q969U6 566 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 CHAMP1Q96JM3 812 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 SCYL1Q96KG9 808 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 ALDH8A1Q9H2A2 487 aaPredicted RBP7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 TRMT13Q9NUP7 481 aaKnown RBP7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 GEMIN8Q9NWZ8 242 aaKnown RBP7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 SPEF1Q9Y4P9 236 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 PCDHA2Q9Y5H9 948 aa7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 TIMM13Q9Y5L4 95 aaPredicted RBP7.86□□□□□ -1.15
LSMEM1-203ENST00000455302 TNKSO95271 1327 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 PRRC2BQ5JSZ5 2229 aaKnown RBP7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 LCHNA4D1U4 455 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 M0R2C6 588 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 ARNTLO00327 626 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 CYP26A1O43174 497 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 NPHS1O60500 1241 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 RPL11P62913 178 aaKnown RBP7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 AMOTL1Q8IY63 956 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 SHISA5Q8N114 240 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 ANKS1AQ92625 1134 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 CCDC17Q96LX7 622 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 NUP88Q99567 741 aaPredicted RBP7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 KATNBL1Q9H079 304 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 CCDC8Q9H0W5 538 aaPredicted RBP7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 RAVER2Q9HCJ3 691 aaKnown RBP7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 DCP1AQ9NPI6 582 aaPredicted RBP7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 SEMA3GQ9NS98 782 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 FBXO40Q9UH90 709 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 DBNLQ9UJU6 430 aaKnown RBP7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 CACNA1AO00555 2505 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 FOCADQ5VW36 1801 aa7.85□□□□□ -1.15
LSMEM1-203ENST00000455302 ASB14A6NK59 587 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 H3BQ06 376 aaPredicted RBP7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 NEMP1O14524 444 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 KATNA1O75449 491 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 SURF6O75683 361 aaKnown RBP7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 BAIAP3O94812 1187 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 LCP1P13796 627 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 PTGS1P23219 599 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 TMPRSS15P98073 1019 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 CNTN2Q02246 1040 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 LAPTM5Q13571 262 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 TTF1Q15361 905 aaPredicted RBP7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 CRY1Q16526 586 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 TMEM177Q53S58 311 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 SLC9C2Q5TAH2 1124 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 ABHD17CQ6PCB6 329 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 EP400NLQ6ZTU2 488 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 TMCO2Q7Z6W1 182 aaPredicted RBP7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 CHST14Q8NCH0 376 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 CHST13Q8NET6 341 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 ASB11Q8WXH4 323 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 TGS1Q96RS0 853 aaKnown RBP7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 UPF3BQ9BZI7 483 aaKnown RBP7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 B4GALT6Q9UBX8 382 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 PLAGL2Q9UPG8 496 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 FAM50BQ9Y247 325 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 FAN1Q9Y2M0 1017 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 COQ6Q9Y2Z9 468 aa7.84□□□□□ -1.15
LSMEM1-203ENST00000455302 CCDC66A2RUB6 948 aa7.83□□□□□ -1.16
LSMEM1-203ENST00000455302 RBAK-RBAKDNI3L0D1 243 aa7.83□□□□□ -1.16
LSMEM1-203ENST00000455302 ATP2A1O14983 1001 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms